Lates calcarifer (barramundi perch): 108897113
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Entry
108897113 CDS
T04895
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108897113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108897113
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
EVC complex
108897113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_4
SPARC_Ca_bdg
EFhand_Ca_insen
EF_assoc_2
Dockerin_1
Motif
Other DBs
NCBI-GeneID:
108897113
NCBI-ProteinID:
XP_018552062
UniProt:
A0A4W6DBH6
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Position
LG17:complement(21036647..21047625)
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AA seq
618 aa
AA seq
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MSFRESPRPSDEEEAFYLQCRAAYLAVFRSSLTNIASKQQLCRVLQQAGRNPSHATLNKY
WTPRTSKLNFDDFCEILKCEKKTEETELMRAFKKMDVNGDGYITHSELEKALTTRGEKMT
AEEVNAIFLLADINKDGKLDYAEFCRLLVSTVEQCQMAAMERLEADAKLKRQNFGSQSYS
PPKSSVSSASAAAAQVAATQPQPPEASDVTLKKDSRSSSRPSSARSRRSSLSNSIIMTSS
STKASKIPEPSGLQEWHHSSVKGCFFLEDDGSISSLQYQLHVPQTTNVYLTIQPLSLSHR
PDKCSSWMTVDTALFIMSAGETKEDSTLLHFTESKDKEKYVWKGELNAGTYYLLPFTSGC
RLKKRSKKNLSNKPVELVYRTDTGELDLTRELREALSDIFEVIDLDGNGLLSLEEYNFFE
LRTSGEKCDKDAWAVCKENFDMRKNQLTRQGFMELNLMEATEKDGDPADLWVTLEAMGYN
RMLELVEACPFQIDIHSEGTQLSIQPLSMDSGPKLLNQALQKSITSRTGAKALRGQDNVF
IYTYRGEHRISSLIANKANQKVTVHVNNEQSRNCSSSRGMSVFAVEVPARTKMVCQHVLP
INDKQDWTYNCVETILPF
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcgagagtcaccgcgtccttctgatgaagaggaggctttctacctgcagtgc
agagctgcgtacctcgctgtgttcagatctagtttgacaaatatcgcttccaagcagcag
ttatgtcgtgttctccagcaagcaggaagaaatccatcccatgccactctcaataaatac
tggaccccgagaacgtctaaactgaactttgacgacttctgtgagattctcaagtgtgag
aaaaaaactgaagaaacagaactgatgagagctttcaaaaagatggatgtgaacggtgat
ggctacatcacacacagtgaactggagaaggccctcaccactagaggagagaaaatgacg
gctgaagaggtgaatgccattttcttattagctgacatcaacaaggacggcaaactggac
tacgcagagttctgcagattgcttgtgtctacagtagaacagtgtcagatggctgctatg
gagaggctcgaggcagacgccaagctgaagagacagaactttggcagtcagtcgtacagc
cctccgaagagctccgtgtcgtcagcgtcagcagcagcagcgcaagtggcagcgactcag
cctcagcctccagaagcatcagacgtgacactcaagaaagacagcagatcgtcctctcgt
ccttcctctgctcgcagcaggcggtcgtctctgtcgaactcaatcattatgacttccagc
agcactaaggccagcaaaataccagagccttcaggcttacaggagtggcatcacagttct
gtgaaaggatgtttcttcctggaggatgatgggagtatcagctctctgcagtaccagctc
cacgtcccccagacaaccaacgtctacctgactatccaaccgctcagcctcagccacaga
cctgacaagtgttcatcatggatgacagtggatacagctctttttattatgtctgctggt
gaaaccaaagaagactcaactctactgcatttcactgagtcgaaagacaaagaaaagtat
gtttggaaaggagaactgaatgctgggacctactacctgctccccttcaccagcggctgc
agactaaagaaaaggagcaaaaagaacctttctaataaacctgtggagcttgtctacagg
actgacactggagaactagacctcaccagagagctcagggaggcgctgtctgacatcttt
gaggttatagacctggatggaaatggtttgctcagtctggaggaatacaatttctttgag
ctgaggaccagcggagagaaatgtgacaaggatgcctgggctgtctgtaaagaaaacttt
gatatgagaaagaaccagctgacacggcagggcttcatggagttgaacctgatggaggcc
acagagaaagatggagaccctgcagacctgtgggtcaccctggaagccatgggctacaac
cgcatgctggagctagtagaggcctgtccattccagatagatatacacagtgaaggcact
cagctgtccattcagccactcagcatggactcaggaccaaagcttctgaaccaggctctc
caaaaatccatcacatccagaacaggggccaaagcgctgaggggacaagacaatgttttc
atctacacctacagaggagagcacaggatctcctccctcatagccaacaaggccaaccag
aaagtgactgtgcacgtaaacaatgagcagagcaggaactgcagcagcagtagaggcatg
agtgtgtttgctgtagaggtgccagcccgaactaagatggtgtgccaacatgtgctgccc
atcaatgacaaacaggactggacctacaactgtgtggagaccatactacccttctaa
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