Lates calcarifer (barramundi perch): 108900914
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Entry
108900914 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: extracellular calcium-sensing receptor-like
KO
K04613
vomeronasal 2 receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108900914
G protein-coupled receptors [BR:
lcf04030
]
Others
Chemoreception
Vomeronasal pheromone
108900914
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
NCD3G
Peripla_BP_6
aRib
Motif
Other DBs
NCBI-GeneID:
108900914
NCBI-ProteinID:
XP_018557697
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Position
LG21:complement(14359979..14363951)
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AA seq
814 aa
AA seq
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MDGDYVIGGVFSIHRYIHTVKHNYTTMPEPLRCTGSINSRELRFSRAMIFAIEEINNSTK
LLPGIRLGYQIHDSCASVPIAVHVTFQLSNGLDSVFYTGDNCSQSGTVMAVVGESGSTPS
ISMSRVIGPFNIPQVSHFATCACLSNKQEYPSFFRTIPSDQFQADALAKLVKHFGWTWIG
AVRSDSDYGNNGMASFLDAAHKEGICVEYSESFFRTHPRSKIQRVADVIRRSTAMVVVAF
VAAGDMRILLEELSREPSPHRQWIGSEAWVTDPDMLRFTFCAGAIGFGIQQSVIPGLRDF
LLDLSPTEVAESPVLTEFWEDAFNCRLGKSAATDESVCDGTEDLTSLQSPYTDKSKFRIT
NMVYKAVYAIAHAIHNAVCQKTNSTTHCDKLTRIESKQVLAQMKKVNFSQNGYDVSFDAN
GDPVARYELVNWQKSKSGSIELVTVGLYDASLPVGQEFHINKNLTWVEDSTQVPSSVCSD
SCPPGTRKVLQKGKPICCYDCIPCPEGEISNATDSPDCFPCPKEFWPNAERNICFPKPVE
FLSYNEVLGIILTAFSVGGACLAVITAAVFFHHRTSPIVRANNSELSFLLLFSLTLCFLC
SLTFIGTPSEWSCMLRHTAFGITFVLCISCVLGKTIVVLMAFKATLPGSNVMKWFGPPQQ
RMTVVSFTFIQVLICTIWLVLSPPFPRKNLTIYKERIILECALGSAVGFWAVLGYIGLLA
VFCFVLAVLARKLPDNFNEAKLITFSMLIFCAVWITFIPAYVSSPGKFTVAVEIFAILAS
SFGLILCIFAPKCFIILFKPEKNTKKHLMNKNQY
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgactatgttattgggggtgttttctccattcaccgctatattcacacagtg
aagcataactacaccaccatgcctgagccactgaggtgcacagggagtatcaactcccgt
gaactgcgcttctcacgcgcgatgatcttcgccatcgaggagattaataacagcacgaag
ctgctgccgggcatcaggctcggctatcagatccacgactcctgcgcctcggtgcccata
gcggtgcatgtgacattccagctctcaaatggcctggactcggtgttttacaccggtgac
aactgttcacagtctggtacagtgatggctgtcgtgggtgagtctgggtccacgccatcc
atcagcatgtcacgcgtcatcgggccctttaacatcccccaagtgagccactttgccact
tgtgcatgcttgtccaataagcaggagtacccgagtttcttcagaacaatccccagtgac
cagttccaggctgatgcgctggccaaactggtgaaacacttcggctggacctggataggt
gctgtccggtcagattcggactatggcaataatggcatggcgtctttcctggacgcagcg
cacaaagaggggatctgtgtggaatactctgaatctttctttcggactcatccacgtagc
aaaatccagagagtggctgatgttatccgcaggtcaacagctatggttgttgtagcattt
gttgcagcaggagacatgaggatcctgttagaggagctgtcccgagaaccttccccccat
cgccagtggataggcagtgaggcctgggtaaccgacccagacatgctgaggttcaccttc
tgtgctggagccattggatttggtattcagcaatctgtcatccctggtctgagagacttc
ctgctggatctgtctcccactgaagtggctgagtccccagtgctgactgagttctgggag
gatgcattcaactgcagactgggaaaaagtgcagccacagatgagagtgtgtgcgatgga
acagaagacttaacgtcactccagagcccgtacactgacaaatctaagttccgaatcact
aacatggtgtacaaggctgtttatgcaatagcacatgccattcataatgcagtgtgtcag
aaaacaaattctacaactcactgtgacaaactcacaaggatagagtccaaacaggttctt
gctcagatgaagaaagtcaatttttcccaaaatggttatgatgtgtcatttgatgctaac
ggggatcctgtggccagatatgagttggtcaactggcaaaaaagtaagagtggcagcatt
gagttggtgacagtagggctctatgatgcatcactgccagtgggtcaggaattccatatc
aacaagaacctcacctgggtggaggatagcacacaagtaccctcatcagtctgctctgac
agctgtcctccaggaactcgtaaggtgctgcagaaaggaaaacccatctgctgttatgac
tgtataccatgtcctgagggagagattagcaatgctacagattctcctgattgtttccct
tgccccaaagagttctggcctaatgcagagagaaacatttgtttccccaagcctgtggag
tttctgtcctacaatgaagttctaggaatcatcctgactgcattctcagttggtggtgcc
tgtcttgctgttataacagcagctgtgttctttcatcacagaacatctccgattgtcaga
gccaacaactctgagctgagcttcctgctgctcttctcactgactctctgtttcttatgt
tcattaactttcattggaacaccctctgagtggtcctgcatgctgcgccacacagcattt
gggatcacctttgtcctctgcatctcttgtgttcttgggaaaactatagtggtgttaatg
gccttcaaagctacacttccaggtagtaatgtcatgaaatggtttggtcctccacaacaa
agaatgactgtggtgtccttcacatttattcaagttttaatatgtactatttggttagtt
ctaagtcccccttttccaaggaaaaacttgactatatacaaggagagaatcatcctggag
tgtgcattaggctcagctgttgggttctgggctgtgctcgggtacataggcctactggct
gtcttttgctttgtgttagctgtcctagctcgcaaactacctgataattttaatgaagct
aaactcatcaccttcagcatgctgatattctgtgcagtgtggatcaccttcatccctgca
tatgtcagctctccagggaaatttactgtggctgtggaaatatttgccattctggcctcc
agttttggtctgattctgtgcatttttgctccaaagtgtttcatcatattgtttaagcca
gagaagaacaccaagaaacatttaatgaacaaaaatcaatactag
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