Lates calcarifer (barramundi perch): 108900920
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Entry
108900920 CDS
T04895
Name
(RefSeq) extracellular calcium-sensing receptor
KO
K04613
vomeronasal 2 receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108900920
G protein-coupled receptors [BR:
lcf04030
]
Others
Chemoreception
Vomeronasal pheromone
108900920
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Peripla_BP_6
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
108900920
NCBI-ProteinID:
XP_018557703
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Position
LG21:14170338..14173461
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AA seq
781 aa
AA seq
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MMFAIEEINNSSELLPGVTLGYRIFDSCPSIPLSIRASLNLMNRYEHEEGSCNKLSNVHA
VIGETTSTSTIGIARTMGPFHIPVISHSATCACLSNRRDYPSFFRTIPSDIYQSKALAKL
VKYFGWTWVGAIRTNSDYGNGGMATFLEAAEKEGVCIEYSVAIYRTDPRKWFLEVVDIIK
KSTSKVIVAFADGTDLDILIKELHAQNVTGLQWVGSEGWITYRYIASSVNYAVVQGAVGF
AALNAHIPGLQEFLTNSRPSTTPGDRGLVELWEMVFSCTLTPQTGTHTQGSVAACTGKES
LWDTNTRFTDVSDASLLNNVYKATYAVGYALHMLFTCKDGQGPFENNTCADRENVQPWQV
LHYLTHVNFTTKIGENVFFDELGDPVARYALVNWQMDETGYILFETIGYYDASRPEGQQF
EMKAGVKAIWAGKNLEVPRSICSESCLPGTRRAFVKGKPICCFDCITCADGEFSNSTNAV
KCDKCPPEYKSNEERNSCDLKAIEFLTFRELMGILLVTFSVFGACLAMTVALIFFHYRQT
PIVRANNSELSFLLLFSLTLCFLCSLTFISRPSEWSCMLRHTAFGITFVLCISCVLGKTI
VVLMAFRATLPGSNVMKWFGPTQQRLSVLAFTLIQVVICILWLTINPPFPFKNMSHYKEK
IILECALGSPVGFWAVLGYIGLLALLCFVLAFLARKLPDNFNEAKFITFSMLIFCAVWIT
FIPAYVSSPGKFTVAVEIFAILASSYGMLFCIFLPKCYIILLKPENNTKKHLMGKVTSRA
L
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgcaatagaggagatcaacaacagctcagagctgctaccaggagtaacactg
ggctacaggatctttgactcctgccccagtatccctctgtccatcagggcatcgctaaac
ctgatgaataggtatgagcatgaggaaggcagctgtaacaaactctccaatgtgcacgct
gtcataggggaaaccacatccacttctacaataggtattgcacgcaccatgggacccttc
catatacctgtgatcagtcattcagctacttgtgcatgtcttagtaatagacgagactat
ccttctttcttcagaaccatacctagtgacatttaccagagcaaagcactggctaagctg
gtaaaatactttggttggacctgggtaggggctattagaactaacagtgactatggaaat
ggtggaatggccactttcttggaagcagctgaaaaggaaggtgtatgtattgagtactca
gtggctatttataggactgaccccaggaagtggttcttagaagtggtggacattataaag
aaatccacctctaaggtgatagtggcatttgctgacggaacagaccttgacatccttatc
aaagagctccatgctcagaatgtgacaggcctgcagtgggtgggcagtgagggctggatc
acttatcgctatattgcctcttcagtaaactacgctgtggtccagggagcagtgggcttc
gcagcgctcaatgctcacatacctgggctacaggagttcctgactaacagcaggccctcc
accacaccaggagaccggggtctggtagagttgtgggagatggtgttcagctgcaccctg
actccccagacagggactcacactcagggttcagttgcagcctgcactgggaaggagtct
ctgtgggacacaaacacacgcttcacagatgtttcagatgccagtctgctgaataatgtt
tacaaggccacatatgctgtaggttacgcactgcacatgctctttacttgcaaagatgga
caggggccttttgagaacaacacttgtgctgatagggaaaatgtgcaaccatggcaggtg
ctgcattatctgacccacgtcaatttcaccactaagattggtgaaaacgtgttctttgat
gagctgggtgaccctgtggcacgttatgcactggtaaattggcagatggatgagacaggt
tacatactatttgaaaccattggttactatgatgcctctcgacctgagggtcagcagttt
gaaatgaaagcaggcgtgaaagccatctgggcagggaagaatctcgaggtgccaaggtcc
atttgcagtgagagctgtttgccagggacccgccgagcttttgttaagggcaagcctatc
tgctgttttgactgcatcacctgtgctgacggggagttcagcaacagtacaaatgcagtg
aaatgtgacaaatgcccccctgagtacaagtccaatgaagagaggaacagctgtgacttg
aaagccattgagttcctcaccttcagggaactgatgggtatactgttggtcaccttttct
gtctttggtgcctgcctggcaatgactgtagcactgatatttttccactacaggcaaact
cctatagtcagagccaacaactctgagctgagcttcctgctgctcttctccttgactctg
tgtttcctgtgctctctgaccttcatcagccggccctctgagtggtcctgcatgctgcga
cacacagcattcggcatcacctttgtcctctgtatctcttgtgttctggggaaaactata
gtggtgttaatggccttcagggctacacttccaggcagtaatgtgatgaaatggtttggg
ccaacacagcagagactcagtgttctggctttcactctcatacaggttgtgatctgtata
ctttggctgacaatcaaccctccatttcccttcaaaaatatgagccactacaaagagaag
attatacttgagtgtgctttaggatcacctgtagggttctgggctgtgttaggatacata
gggctcttagctttgttatgttttgtacttgcatttctggcacgaaagctgcctgacaat
ttcaacgaagctaaatttatcactttcagcatgttgatattctgtgcagtctggatcacc
tttatcccagcttatgtcagctctcctgggaagttcactgtagctgtggagatatttgct
attctggcttcaagttatgggatgctgttttgtatttttttgcccaagtgctacataatt
ttattaaaacccgagaacaatacaaagaaacacttgatgggtaaggtgacctcaagagcc
ctgtga
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