Longicatena caecimuris: L3BBH23_14180
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Entry
L3BBH23_14180 CDS
T07231
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
lcg
Longicatena caecimuris
Pathway
lcg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
L3BBH23_14180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcg03400
]
L3BBH23_14180
DNA repair and recombination proteins [BR:
lcg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
L3BBH23_14180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
zf-ribbon_3
iSTAND
zf_Rg
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
BCT44973
LinkDB
All DBs
Position
complement(1520421..1521215)
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AA seq
264 aa
AA seq
DB search
MAVAHKGAISFGLVHIPIQLYRTTQDTAISFNQLCKDTHERVKYKKYCPNCDKELKSEDI
VKGYQYEKDKYVIMTNDEIEKLKVEKDRTIQIQHFTSLANINDLYYEKNYYAVPEKHAEK
AYELLRKAMQEENVVAVAKTVIGTKETLLALCPSDEEIIVKTLFYEEELVENPKTILHPD
IDKAELNMAKQLITSMSKPFEPETYHDEFQERLRNAIEEKIDGHQILHSSDRKEDHKTPI
DLMEALKQSIEATKPKTKRKRVRH
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgcacataaaggagctatatcttttggacttgttcatatccctatacaactg
tatcgaacaacacaggatacagctatatcctttaatcaactttgtaaagatacccatgaa
cgcgtaaaatataaaaaatattgtcctaattgtgacaaagaattaaaaagtgaagatatt
gtaaaaggctatcaatatgaaaaggataaatatgtcatcatgacgaacgatgagattgaa
aagttaaaagttgaaaaagatcgtacgatccagattcaacatttcacttctttagccaat
atcaatgatttatattatgaaaagaattattatgccgttcctgagaaacatgccgaaaaa
gcatatgaattgctacgtaaagccatgcaggaagaaaatgttgttgcagttgctaaaacg
gttattggcactaaagaaacgctgctggctctttgcccaagcgatgaagaaattatcgtc
aagacccttttctatgaagaagaattagtcgagaatcccaaaaccattctgcacccggat
attgataaagctgagttgaacatggcaaaacaattgataacatccatgagcaaaccattt
gaaccagaaacgtatcatgatgaatttcaagagcgcttacgcaatgcaattgaagaaaag
atcgatggtcatcaaatattgcacagcagcgatcgtaaggaagatcataaaactccaatt
gatcttatggaagccttaaaacaatccattgaagccacgaagccgaaaaccaagcggaaa
cgggtgcgtcactaa
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