Leptothrix cholodnii: Lcho_1750
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Entry
Lcho_1750 CDS
T00681
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Lcho_1750
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lch01007
]
Lcho_1750
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lch03016
]
Lcho_1750
Enzymes [BR:
lch01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Lcho_1750
Amino acid related enzymes [BR:
lch01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Lcho_1750
Transfer RNA biogenesis [BR:
lch03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Lcho_1750
Prokaryotic type
Lcho_1750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
ACB34017
UniProt:
B1XYZ8
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All DBs
Position
1869598..1872048
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AA seq
816 aa
AA seq
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MQFPESWLREFCNPELSSDALAHLLTMSGMEVEEQRPVAPAFHGIVVAEILEAEQHPNAD
KLRVCTVDAGPHSPDGPLQIVCGAPNARAGIRIPLATIGAELPPGEDGKPFKIGKGKLRG
VESFGMLCSARELKLSEDHGGLLELPADAPLGQDIRQFLNLDDALFTLKLTPNLGHCLSV
YGVAREVSALTGSPLITPAIEPVRPSHDARLPVRIEAPDLCGRFSGRIVRGINPQARTPA
WMVERLARCGQRSVSALVDISNYVMFEYGRPSHIFDLDKIQGGLVVRWGRAGETLKLLNG
NTVTLDEQVGVIADEHAGQQSVESLAGIMGGDTTAVSDDTRNVYVEAAFWWPEAVAGRSR
RYNFSTDAGHRFERGVDPAQTVEHIERITALIVQICGGADTVCGPVDDQTARLPERQPVA
LRVARAAKVIGMPLTQVQCAGVFERLGLPFTAGEGVLTVTPPSWRFDLQIEEDLIEEVIR
VIGFDQLPLTPPLAPVTARVRSESQRGSHALRRTVAALDYQETINFSFVEERWETELAGN
DQPIRLLNPIAAPLSVMRSSLIGSLIQVLRHNLTRRAPRVRVFELGRVFKRDASVQTSEQ
SVVGIDQPLRLAGLAWGPADSVQWGSKERAVDFFDVKGDVQALLAPRVARFVAAEHPAMH
PGRCARVEVDGTVIGHVGELHPRWRQAYELPSAPVLFELDLASLLAREVPVYVPVPRQQT
VTRDLALIVKDSVPHDDVIDTIMQAPTGGLMRSARLFDVYRPTAQTTGLAEGERSLAIRL
ELLDDETPLTDARSDAAIQAVIDAVQSGLGARLRGA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgcaattccccgaatcgtggttgcgcgagttctgcaaccctgaactgagcagcgatgcg
ctggcccatctgctgacgatgtccggcatggaagtcgaagagcagcgccccgtcgcgccc
gccttccacggcatcgtcgtcgccgagatcctcgaagccgaacagcacccgaacgccgac
aagctgcgcgtgtgcacggtcgatgccggtccgcacagcccggacggcccgctgcagatc
gtctgcggtgcccccaacgcgcgtgctggcatccgcattccgctcgccaccatcggcgcc
gaactgccgccgggcgaggacggcaagccgttcaagatcggcaagggcaagctgcgcggc
gtcgagagcttcggcatgctgtgctcggcgcgcgagctcaagctgtccgaggaccacggc
ggcctgctcgaactgccggccgacgcgccgctcggccaggacatccgccagttcctgaac
ctcgacgacgcgctgttcacgctcaagctcacgcccaatctgggccactgcctgagcgtc
tacggcgtggcgcgcgaagtctcggccctgaccggctcgccgctgatcacgccggcgatc
gagccggttcggcccagccacgacgcccgcctgccggtgcgcatcgaagcgcccgacctg
tgcggtcgcttctcgggccgcatcgtgcgcggcatcaacccgcaggccaggacacccgcg
tggatggtcgagcgcctggcgcgctgcggccagcgttcggtcagcgcgctggtcgacatc
tcgaactacgtgatgttcgaatacggccggccgtcgcacatcttcgacctcgacaagatc
cagggcggcctggtcgtgcgctggggccgcgccggcgaaacgctcaagctgctcaacggc
aacaccgtcacgctcgacgagcaggtcggcgtgatcgccgacgaacatgccggccagcag
tcggtcgagtcgctcgccggcatcatgggcggcgacaccaccgcggtgagcgacgacacc
cgcaacgtctacgtcgaagccgccttctggtggcccgaggcggtggccgggcgttcgcgc
cgctacaacttttcgaccgacgccggccatcgcttcgagcgcggtgtcgatccggcgcag
acggtcgagcacatcgagcgcatcaccgcgctgatcgtgcagatctgcggcggcgccgac
acggtctgcggcccggtcgacgaccagaccgcgcgcctgcccgagcgtcagccagtggct
ctgcgcgtggcgcgggcggccaaggtgatcggcatgccgttgacacaggtgcagtgcgcc
ggcgtgttcgagcgtctgggcttgccgttcaccgcgggtgagggcgtcctgaccgtgacg
ccgccgagctggcgtttcgacctgcagatcgaggaagatctgatcgaggaggtgatccgc
gtcatcgggttcgaccagttgccgctgacgccgccgctggcgcccgtgacggcgcgcgtg
cgcagcgagtcgcagcgtggcagccacgcgctgcgccgcaccgtggccgcgctcgattac
caggaaacgatcaacttcagcttcgtcgaggaacgctgggagaccgaactggccggcaac
gatcagccgatccgcctgctcaacccgattgccgcaccgctgtcggtgatgcgctccagc
ttgatcggcagcctgatccaggtgctgcgccacaacctgacacggcgtgcgccgcgggtt
cgggtgttcgaactcggccgcgtcttcaagcgcgatgcctcggtgcagaccagcgagcag
tcggtcgtgggcatcgatcagcccttgcgtctcgcgggtctggcctggggcccggcagac
agcgtgcagtggggcagcaaggagcgcgcggtcgatttcttcgacgtcaagggtgacgtg
caggccttgctggccccgcgtgtggcgcgctttgtcgcggccgaacatccggcgatgcat
ccgggccgctgtgcccgggtggaagtcgatggcacggtcatcggtcacgtcggtgaactg
cacccgcgctggcgccaggcctatgagttgccgagcgcaccggtgctgttcgaactcgat
ctcgccagcctgctcgcgcgcgaggtgcccgtttacgtgccggtgccgcgccagcagacc
gtgacacgcgatctggcgctgatcgtcaaggacagcgtgccccatgacgatgtcatcgac
acgatcatgcaagcgcccaccggcggcctgatgcgcagcgcgcggctgttcgacgtctac
cggccgaccgcgcagaccaccggtctggccgagggtgaacgcagcctggcgatccgcctc
gagctgctggatgacgaaacgccgctcaccgatgcgcgcagcgatgcggccatccaagcc
gtgatcgatgcggtgcaatccggtctcggcgcccggttgcgcggcgcctga
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