Lichenicola cladoniae: HN018_09245
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Entry
HN018_09245 CDS
T07054
Name
(GenBank) DEAD/DEAH box helicase
Organism
lck
Lichenicola cladoniae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
Flavi_DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QKE90206
UniProt:
A0A6M8HPG6
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Position
complement(1999722..2002949)
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AA seq
1075 aa
AA seq
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MPTPFSPDDLSRFFDASVLRRGRSLILLGSVTATLEDGSISVAVDHLEARHTATVAPSPR
GDKVVFPSRCSCGQSACLHIAAGALAALDRYPALRKPERKLPPGADADPVGEERHRLLFE
LSPSEPPHACYVETLMVGERTGVAVATTPARILADRSSTESSRIMARLLGSGETSRNPVA
PASVTPVLGLLSRLGRARWQATQKTLVRGEERAFQADVAPEMPEHSAIILGDAGPWYVDA
ETGALGRVRLRQAPVVPRAAPVLPSPARPIVRPYGTGPRPPDRSRFTPSRPATSRGGQSG
RKVTTTIDPVIREHPPAPVLRLRRTECPDESGHLKMVDALTVEFDYDGILVASHDDRQFL
RVHRPGDLPGHPSFVRRNTAAEAGALDVLRQHGLTQMRVADPTNVKGQMVFVYRTGDATD
RWQTFVLDQVPALEAEGWQNKIERVFLPRAVAALGDYDVRVTDAEAGKFSLDFGVEVDGT
RIPLLPILSRLLERGGIEAAKIVDDEVITSLDDGRILKLPAERIRRLLAVMSDLIESASR
LGEDRLLLSDGEAETVLGLEDLLTTRWENATAIEAYAEHFRHDMTLPTVAVPASFTATLR
PYQQQGVNWLQHLRSVGLNGFLADDMGLGKTAQTIAHIVIEEAEGRLDQPVLIVVPTSLV
ANWTAELAKFAPHLGVVVLHGVNRHERRADLTGIHVVVTTYTVLTRDIEAMKQLPWHLAV
LDEAQVIKSPDAMSTKAVCQLTTRHRLCLSGTPIENNLQELWSEFAFLMPGLLGDRKGFA
KRFRRPIEKDNDPQRRAQLIRRIKPFLMRRTKAEVATDLPPKHTILRRIDLAADQRELYD
TIRGTLYDKVRKQVAELTTSQSRIVMLDALLKLRQVCCDPRLVKLPSARLIESSSKLDEL
LEMITEMIPEGRRILLFSQFTTMLDLIKPRLVEAGIEFAELRGDTRDRAEPVRTFESGAV
SLFLISLKAGGRGLNLTSADTVIHYDPWWNPAAEDQASDRAHRIGQTKPVFVYKLIAADT
VEDRIVELQRRKANLANIALSEDEEFSGVDVDDVEFLFGSSMQPEPVAAEMSETA
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgccgacacctttctccccggacgatctcagccggttctttgacgcgagcgtattgcgg
cgcggacgctccctgatcctgctcggatcggtgaccgccacgctcgaggacggctccatc
tccgtcgccgtggatcacctcgaggcgcgccataccgccacggtcgcgccgtcgccgcgc
ggcgacaaggtggtgttccccagccggtgcagctgcggccagtcggcctgcctgcacatc
gcggctggtgcccttgcggcactcgatcgctatccggcgctgcgcaagccggagcgcaag
ctaccgccgggcgcagatgccgatccggtcggcgaggagcgccatcgcctgctgttcgag
ctctcgccgagcgagccgccgcacgcctgctatgtcgagaccctgatggtgggggagcgg
accggcgtggccgtcgcgaccaccccggcccgcatcctggccgaccggtccagcaccgag
agcagccggatcatggcgcggctgctgggcagcggcgagaccagccgcaacccggtggcg
ccggcatcggtgaccccggtgctcggcctgttgtcgcgcctcggccgcgcacgctggcag
gcgacgcagaagacgctggtccgcggcgaggagcgcgcgttccaggccgacgtcgccccg
gagatgcccgagcactcggcgatcatcctgggtgacgccggcccgtggtacgtcgatgcg
gaaaccggcgcgcttggccgggtgcggctgcgccaggccccggtcgtaccccgggcggcc
ccggtgctaccgtcgccggcgcgtccgatcgtcaggccatacggcaccggcccgcgtccg
ccggaccggtcccgcttcacgccgagccggcccgccacctcgcgtggcggccagtccgga
cggaaggtcaccaccaccatcgacccggtcatccgagaacatccgccggcgccggtcctg
cggctgcgccggaccgagtgcccggacgagtccggtcacctgaagatggtcgacgccctg
accgtcgaattcgattatgacggcatcctggtcgccagccacgacgaccggcagttcctg
cgggtgcatcgcccgggagacctgccggggcatccgagcttcgttcgccgcaacacggcc
gccgaggccggggcgctcgacgtgctgcggcagcacggcctcacccagatgcgcgtcgcc
gacccgaccaacgtcaagggccagatggtgttcgtctatcgcaccggcgatgccaccgac
cggtggcagaccttcgtgctcgaccaggtgccggcactcgaggcggaaggctggcagaac
aagatcgagcgggtgttcctgccgagggcggtcgcggcgctgggcgattacgatgtgcgg
gtgaccgatgccgaggccggcaagttctcgctggatttcggcgtcgaagtggacggcacc
cgtatcccgttgctgccgatcctgtcccgcctgctcgagcgcggcggcatcgaggcggcg
aagatcgtcgatgacgaagtgatcaccagtctcgatgacgggcgcatcctgaagctgccg
gccgaacgcatccgtcgtttgctggcggtgatgtcggacctgatcgagtctgcgtcgcgc
ctgggcgaggaccggctgctgctgtccgacggcgaggccgagacggtgctcggtctcgag
gatctgctcaccacgcgctgggaaaatgccaccgcgatcgaggcgtatgccgagcatttc
cggcacgacatgacgctgccgacggtggcggtcccggccagcttcaccgccacgctgcgt
ccgtaccagcagcagggcgtcaactggctgcagcacctgcgctcggtcgggctgaacggc
ttcctcgccgacgacatgggtctcggcaagaccgcgcagaccatcgcccatatcgtcatc
gaggaggccgagggcaggctcgaccagccggtgctgatcgtggtgccgaccagcctggtg
gccaactggaccgccgagctggcgaagttcgcgccgcatctcggcgtcgtggtgctgcat
ggggtgaaccgtcacgagcggcgcgccgacctgaccggcatccatgtggtcgtcaccacc
tatacggtgctgacccgcgacatcgaggcgatgaagcagctgccctggcacctggccgtg
ctcgacgaggcgcaggtcatcaagagcccggatgcgatgtccaccaaggcggtctgccag
ctgaccacacggcatcggctgtgcctgtcgggcacgccgatcgagaacaacctgcaggaa
ttgtggtcggagttcgcgttcctgatgccggggctgctgggcgatcggaaggggtttgcc
aagcgcttccgccgcccaatcgaaaaggacaacgacccgcagcggcgcgcgcagcttatc
cgccgcatcaagccgttcctgatgcgccgcaccaaggccgaggtggcgaccgacctgccg
ccgaagcacaccatcctgcgtcgcatcgatctcgcagccgaccagcgcgagctgtacgac
accatccgcggcacgctgtacgacaaggtgcgcaagcaggtggccgaactcaccacgtcg
cagagccggatcgtcatgctcgatgcgttgctgaagctgcgccaggtctgttgcgatccg
aggctggtgaagcttccgtcggcgcggctgatcgagagttccagcaagctcgacgaactg
ctggaaatgatcaccgagatgatccccgagggacgccgcatcctgctattctcgcagttc
accaccatgctcgatctcatcaagccgcgcctggtcgaagccggtatcgaattcgcagag
ctgcgtggcgatacgcgcgatcgtgcggagccggtacgcacgttcgagagcggcgcggtc
tcgctgttcctgatcagcctcaaggcaggcggccgcgggctgaacctgacctcggcggat
acggtcatccattatgatccgtggtggaatcccgcggcggaggatcaggcttcggaccgg
gcgcatcggatcggccagaccaagccggttttcgtgtacaagctcatcgcggcggacacg
gtcgaggaccggatcgtcgaactgcagcgccggaaagccaacctcgccaacatcgcgctg
agcgaggacgaggagttcagcggcgtcgatgtcgacgatgtggagttcctgttcggcagt
tccatgcaaccggagccggttgcagccgagatgtcggagacggcgtga
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