Lichenicola cladoniae: HN018_14175
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Entry
HN018_14175 CDS
T07054
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lck
Lichenicola cladoniae
Pathway
lck03030
DNA replication
lck03430
Mismatch repair
lck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HN018_14175 (dnaQ)
03430 Mismatch repair
HN018_14175 (dnaQ)
03440 Homologous recombination
HN018_14175 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lck03032
]
HN018_14175 (dnaQ)
03400 DNA repair and recombination proteins [BR:
lck03400
]
HN018_14175 (dnaQ)
Enzymes [BR:
lck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HN018_14175 (dnaQ)
DNA replication proteins [BR:
lck03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HN018_14175 (dnaQ)
DNA repair and recombination proteins [BR:
lck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HN018_14175 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QKE91038
UniProt:
A0A6M8HRS4
LinkDB
All DBs
Position
complement(3106722..3107396)
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AA seq
224 aa
AA seq
DB search
MMRAILFDTETTGLNPLTGDRVIEIAALELVGDLPTGRHYHVLIDPERDIPEEASRVHGY
TRAHLLGQKKFHEVAEAFLEFIGDDMLIAHNARFDFGFMNAEFARLDMPALPLARMIDTL
DMARIRFPGLPNSLDSLCRRFAIDLAERTTHNALLDCKLLAQVYVELMGGRQRGLELARE
EGGSSSISYALSRTRQPRPIVPTPAELEAHAAFVAQLKLPVWLD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgcgatcctgttcgacacggaaaccaccgggctcaacccattgaccggcgac
cgggtgatcgagatcgcggcgctggagctggtcggggacctgccgaccgggcggcactac
catgtgctgatcgacccggaacgcgacatcccggaggaggcgtcgcgtgtacacggctac
acccgtgcgcacctgctcggacagaagaagttccacgaggtggcggaggcgttcctcgag
ttcatcggtgacgacatgctgatcgcgcataacgcgcggttcgatttcggcttcatgaat
gccgagttcgcgcgtctggacatgcccgcgctgcctttggcgcggatgatcgatacgctg
gacatggcccggatccgctttcccggcctgccgaacagcctggactcgctgtgccggcgg
ttcgcgatcgacctcgccgagcgcacgacccacaacgcgctgctcgactgcaagctgctg
gcgcaggtctatgtcgagctcatgggcgggcggcagcgcgggctcgagctggcgcgggag
gaggggggatcgtcgtcgatctcctacgcgctgtcccggacccgtcagccacgcccgatc
gtgcccacgccggccgaactggaagcgcatgcggccttcgtcgcccagttgaagctgccg
gtctggctggactga
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