KEGG   Latimeria chalumnae (coelacanth): 102352219
Entry
102352219         CDS       T02913                                 
Symbol
RPP40
Name
(RefSeq) ribonuclease P/MRP subunit p40
  KO
K14530  ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102352219 (RPP40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcm03009]
    102352219 (RPP40)
   03016 Transfer RNA biogenesis [BR:lcm03016]
    102352219 (RPP40)
   03029 Mitochondrial biogenesis [BR:lcm03029]
    102352219 (RPP40)
Enzymes [BR:lcm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     102352219 (RPP40)
Ribosome biogenesis [BR:lcm03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     102352219 (RPP40)
Transfer RNA biogenesis [BR:lcm03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    102352219 (RPP40)
Mitochondrial biogenesis [BR:lcm03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    102352219 (RPP40)
SSDB
Motif
Pfam: Ribonuc_P_40
Other DBs
NCBI-GeneID: 102352219
NCBI-ProteinID: XP_005997017
Ensembl: ENSLACG00000014848
UniProt: H3B4N5
LinkDB
Position
Un
AA seq 361 aa
MLCNLQKCPRHLLVCEKSNFKNEKSRHSTHVESHYFNYRASILLPECSTLPRELSTLVGN
LRRYYLVKNVSLHELVTEEFFSAFIKKGSFYALSFNTRIDQDNTVAFLPTGKLVLSVDKD
TFEELGLEGRPSQYTHKRATRYTILVDLIDSSFAPGTKKHKRLVWALTEKKPLLFDLLIA
GYTAGGEEMKLSSYFYKYSCKEYHPTVSVKTLRNTECPVLYSRKLNGEPDQFCDTQEFFD
WLGAVSNNVECDNTSCSFLSNYCCPQPSTVMDQACLCTVTGFILPETVHQLLEWLCHYFD
DPKLSQWVTLTVHGFADSPVSWRENEHGFHKGGENLYNFVIFSNWDYWLQMAVGMNDGCP
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgctgtgcaacttgcagaagtgtcccaggcatttacttgtctgcgaaaagtccaacttt
aagaatgagaaatccagacactcaactcacgtggagagtcattatttcaactatagagct
tccattttgctccccgagtgtagcactcttcctcgggaactaagcacccttgttggaaat
ttaagaaggtattacttggtcaagaacgtatctcttcatgaattggttacagaggaattc
ttcagtgccttcattaagaaaggctccttttatgcactttccttcaacacgagaatagac
caagacaatactgtagcttttctcccaacagggaaactcgtcttatcagtagacaaggat
acattcgaagagcttggactagaagggcgaccatcacagtatacccataaaagagctacc
agatacactattcttgttgatctgatcgattcaagttttgctcctggaacaaagaaacac
aagcggttagtctgggccttgacagagaagaagccactcctatttgacttgctgatagct
gggtacacggcaggtggtgaagaaatgaaattgtcctcttacttttacaaatattcttgt
aaagagtaccacccaacagtatctgttaagacattgaggaacacggagtgtccagttctg
tacagtaggaagctgaatggcgagcctgatcaattttgtgacacacaagagttctttgac
tggctaggtgcagtgtcaaataatgttgagtgtgataacacatcctgtagtttcttgtca
aactactgttgcccacagcctagcacggtaatggaccaggcttgtctttgcacagtcact
ggtttcatacttccagagacagtccaccagttgctggagtggttgtgtcattattttgat
gatcccaagctgtcccagtgggtgaccctgactgtacatggttttgcagacagccctgtg
tcctggagagagaatgaacatggattccacaaaggaggagaaaacttgtataattttgtt
atttttagcaactgggactactggctgcagatggctgtggggatgaatgatggttgccca
ccataa

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