Latimeria chalumnae (coelacanth): 102359787
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Entry
102359787 CDS
T02913
Symbol
SOX21
Name
(RefSeq) SRY-box 21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102359787 (SOX21)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102359787 (SOX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
Motif
Other DBs
NCBI-GeneID:
102359787
NCBI-ProteinID:
XP_006005500
Ensembl:
ENSLACG00000006585
UniProt:
H3ACQ6
LinkDB
All DBs
Position
Un
AA seq
247 aa
AA seq
DB search
MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPMPYNLADHEGLKASTLPAGMLPDSL
FSNPEKAAAAAAAAAARVFFPPSAATNPYSLFDFGSKMAEISSSSLPYASPLGYPSGAAG
FAGTGAAGAGGHTHTHSHPSPGNPGYMIPCNCTAWAAPGLQPPLAYILLPGMGKPQLEPY
PAYAAAL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggatcacgttaagcgcccgatgaacgctttcatggtttggtcccga
gctcagaggcgaaagatggctcaggagaaccccaaaatgcacaactcggaaatcagcaag
cggctgggagccgagtggaaacttctgaccgaatcggaaaagagacccttcattgacgag
gcgaagcggctgagggcgatgcatatgaaagagcatcccgattacaaatacagacccagg
cggaaacccaagaccttgatgaagaaggacaaatttgctttccccatgccttataacctg
gctgatcacgaggggctgaaagccagcaccctgccagcgggaatgttgccggactccctc
ttctcaaacccggagaaagcagcagcggcggccgccgcggcagcagcccgtgttttcttt
cctccttcggctgccacaaatccctattcgcttttcgattttgggtccaagatggccgag
atctccagctcgtcccttccttacgcctccccgctggggtacccgagtggagcggcgggc
ttcgctgggacgggtgctgcgggggccgggggccacactcatactcactcgcatccctcc
ccaggcaatcctggctatatgatcccctgtaactgcacggcgtgggcggccccagggctt
cagcctcccctggcttacatccttctgccgggaatgggcaaaccccagctagaaccctac
cctgcttacgctgcagctttatga
DBGET
integrated database retrieval system
