Latimeria chalumnae (coelacanth): 102363759
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Entry
102363759 CDS
T02913
Symbol
USP40
Name
(RefSeq) ubiquitin specific peptidase 40
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcm01002
]
102363759 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcm04121
]
102363759 (USP40)
Enzymes [BR:
lcm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102363759 (USP40)
Peptidases and inhibitors [BR:
lcm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102363759 (USP40)
Ubiquitin system [BR:
lcm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102363759 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
102363759
NCBI-ProteinID:
XP_014343853
Ensembl:
ENSLACG00000013647
LinkDB
All DBs
Position
Un
AA seq
1089 aa
AA seq
DB search
MMFGDLFEEEDDSPFVLNDKGLSGQRSGFKELVPPAPRGAAKLSGIANQGGTCYLNSLLQ
TLLFTPEFREALFSLGEEDLGCLADEENPDSRVRVIPLQLQRLFAQLLLVDQQAASTANL
TDSFGWTSNEERSQHDVQELNRILFSALESSLVGTSGHDLINRLYHGAVVNKISCEECGN
VSERQEDFLDLTVAVKDVSSLEEALWNMYVEEEYFDNENLYRCSACNKLVKAAKSAKLRK
LPLFLTISLLRFNFDFVACQRYKEMGRYTFPLQINLQPFCEQGELADSEYLYELFSVIIH
KGGCYGGHYHVYIKDLDQLGTWYPQDDMMKQVPSEKDAEDSVKLMEMEDPSLVLSVLIAQ
EKSETIAVDKLGQRLLDNMGTSWNKKYRKHHGPIRKFLLNHPETFVLSSDRNWVSLKPSG
TETWDPQPNQRSSAAADPASTQSCKTQGSANAKFTCSHWFDFNDSKVQPIQEKDIEKQFQ
GKESAYMLFYRQCQLQRPAQACGNPGYKVPLHLLYEAEVSNRELQKLREEYDFAVNNMAL
HLHVGIRYKIENGVLHPVSTQQESVVDLTLDRRKTVAELRQAVFQMLDFWEGDMTLSVAK
MLPAGLHLCYTLKDEQQTLWSLGIPDGADIFVWNGREVSGAEVPAGSECEPVLLNILQPT
EGADWRDELLFWTRQVVFPRNTVLGDVCSALADSTGIPAGSLLLCQSAEASSKTSRSWRA
FLVEDMKKTVADFELRDGSSVLVLDCNNHDSSAVAINGDIVTFLSQSGCGQIQIRNFCGG
RVSQAATASVNIRATGDMLVSAVKAKALEELHLEKELENSTCLRLMDRNGKLLPPVREDV
SMKEAKLKLTSTLGLCPGTVPSATQLFLYFVVGSDLQASSEMEVIVEETVSVKQCLKIIQ
EKAGLTGDCWHLRRMDWCYEAGDALNEEEASLKSLKICSGDALVITEGQLPPEGFLKLPV
WLYQSQSDSDNPEWLQDQLNHITDQMINLNTSQVGDMQVPDLPGLELFYMGDVEISAEAT
LGDLKTQVMTLPALQHLCVPSVEFLRAWILENKRPSKILRNHRLQLSNFKLGSSTEIAIQ
LLQREENLG
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttggggatctgtttgaggaagaggacgactccccatttgtgctgaatgataaa
ggtttaagtgggcagaggtcagggttcaaggaattggtaccgccggctcccaggggagcc
gcgaagctgagtgggatcgcaaaccaaggagggacttgctacctgaactccctgctacag
acactgctcttcacacctgagttcagagaagcattattctctctgggagaggaagacctg
ggctgcctggctgacgaggagaatccagactcaagggtccgtgtcatcccgttgcagctg
cagcgactgtttgctcagctcctgttggtggatcagcaggcagcctccacagccaacctg
actgacagctttggttggaccagcaatgaggagcggagtcagcatgacgtccaggagtta
aaccgcatcctctttagtgctctggagagctctctggtggggacctcgggccatgacctc
ataaaccggctctaccatggcgccgtggttaacaagatcagctgtgaggagtgtggcaac
gtcagtgagaggcaggaagacttcctggacctgacggttgctgtgaaggatgtgtctagc
ctggaggaggcgctgtggaacatgtacgtggaagaggaatactttgacaatgagaacttg
tatcgatgtagtgcttgcaacaaactggtcaaagcagcaaagtcagcgaaactgcgcaaa
ctgccactctttctgaccatctccctgctgaggttcaactttgactttgtggcatgtcag
aggtacaaggagatgggccgctacacgttccctctgcagatcaatctgcagccgttttgt
gagcagggtgagctggctgactcagagtatctgtatgaattattttctgttattatacac
aaaggtggctgctatggagggcactatcatgtgtacatcaaagacctcgaccagctggga
acctggtaccctcaagatgacatgatgaagcaagtcccttcagaaaaagatgctgaagac
tcggtgaagctgatggaaatggaagacccatcactcgtcctgagtgtgctgattgcacag
gagaaatcagaaaccatagcagtggataagctaggacaaaggctgcttgacaacatggga
acatcctggaacaaaaagtatcgcaagcatcacggaccaatcagaaagtttttgctaaac
catccggagaccttcgtgctgagttctgacaggaactgggtcagtctaaaaccgagtggc
accgagacctgggacccccagccaaaccaaagatcttctgctgccgcggaccccgccagc
acacagagctgtaaaacccagggctcagcgaacgccaaattcacctgctcccattggttt
gacttcaacgattccaaagtgcagcccatccaggagaaggatatcgagaagcagtttcag
gggaaagagagtgcctacatgctcttttatcggcagtgccagctgcagagaccagcgcaa
gcttgtggaaaccctgggtataaggtacctctgcatctgctatatgaagctgaagttagc
aacagagaacttcagaaactgagggaggagtatgactttgcggtcaataacatggcgctt
cacttacacgtgggaatcaggtataagattgagaacggggtgctgcacccggtctcgacg
cagcaggagagcgtggtggatctgactctcgacaggaggaaaacggtggcagaattgagg
caggcggtgtttcagatgctggatttttgggaaggagacatgactctgagtgtcgcaaag
atgttgccagctggacttcacctctgctacacactgaaagatgagcagcagaccctgtgg
agcctcggaattccagacggagcagacatatttgtgtggaacgggagagaggtgagtgga
gctgaagtgcctgctggctctgaatgtgagcccgtactgcttaacatcctccagccaaca
gagggcgccgactggagggacgagcttctgttttggacgaggcaggtggtgtttccccgg
aacactgtgcttggggacgtgtgcagcgctctggcggactccacggggatccccgcaggg
agcctactgttgtgtcagagtgcggaggcaagcagcaaaacttccaggagctggagagca
ttcctggtggaggacatgaagaagacggttgcggactttgagctgcgtgatggaagctct
gtgcttgtgctggactgtaataaccatgactccagtgcggtggctataaatggggatatt
gtgaccttcctttcccagtcgggctgtggtcagatacaaattaggaatttctgcggcggg
agggtgtcccaggctgcgactgcctcggtgaacattagagcaacaggagacatgttggtg
tctgctgtgaaagccaaagccctggaagagctgcacttagagaaggaacttgagaactcc
acttgtctgaggctgatggacaggaatgggaagcttctgcctccagtgcgggaggacgtg
agcatgaaagaagccaaactgaagctgaccagcacattagggttgtgtcctggaacagtg
cccagtgccacccagctgtttctgtattttgtggtggggagcgatcttcaagccagttct
gagatggaggtgatagtggaagagactgtctctgtgaaacagtgcctgaagataattcag
gagaaagctggactgacgggagattgctggcacctgcggagaatggactggtgctatgaa
gctggagatgccctgaatgaggaggaggcctcactgaaatctctaaagatctgcagtgga
gatgctttggtcatcacagaaggccagcttcctcccgaggggttcctgaagctaccagtt
tggttatatcagtcccagtctgactctgataacccagagtggcttcaagaccagctcaat
cacatcacagaccagatgatcaatctgaatacatctcaagtaggagacatgcaggtgcca
gacctacctggattggagctgttctacatgggtgacgttgagatctcggcagaagcaact
ttaggagatttaaaaacacaggtcatgacccttcctgcccttcagcacttatgtgttcct
tctgttgagttcctcagggcctggattctggagaacaagcggccaagcaagattctccga
aaccaccgactacagctcagcaactttaaactaggaagcagcacagagattgctatccag
ctcctgcagagggaggaaaacctcgggtaa
DBGET
integrated database retrieval system