Larimichthys crocea (large yellow croaker): 104920107
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Entry
104920107 CDS
T04659
Name
(RefSeq) syntaxin-2
KO
K08486
syntaxin 1B/2/3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
104920107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104920107
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104920107
Membrane trafficking [BR:
lco04131
]
SNARE
Syntaxin (Qa)
Stx-PM
104920107
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
104920107
Exosomal proteins of other body fluids (saliva and urine)
104920107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
Syntaxin_2
SNARE
DNA_pol3_theta
Phage_TAC_4
DUF2458
partial_CstF
Tlp
Motif
Other DBs
NCBI-GeneID:
104920107
NCBI-ProteinID:
XP_019115700
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Position
IV:157158..162381
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AA seq
280 aa
AA seq
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MAGLQRDNMRQTAENTVNMEDFFKTVGEVRSLIENISCQAEEVEKRHGAILATPNQDKSN
KDSLELLNNDTKKNANLVRAKLKSMQKDFPVDENSNSPSVIQRIQKNQHSHLTRWFAEVM
RGYHKAQISFREKCKAQIQRQLEIVDKVTTDEELEEMLHRDNLDIFISDINSGARISSQA
LSEIESRHQDIICLESSIKELHEIFADTAMLLEIQGELINNIEKNVTSAAEYVDISKAET
HKAVTYKKNRYKIASLPSFLKRKTTAKTATDQNTSDLNHD
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtctgcagcgggataatatgagacaaactgcagagaacacagtcaacatggag
gattttttcaagacggtgggggaggtgagaagcctcattgaaaacatctcctgtcaagca
gaggaggttgagaagagacatggcgccatcctcgctactccaaaccaagacaagagcaac
aaagactcgctggagctgctgaacaatgacaccaagaagaatgccaacttggtccgagcc
aagttaaaatcaatgcagaaggactttcctgtggatgagaacagtaacagtccttcagta
atccagcgtattcagaagaaccagcactctcatctgactcggtggtttgctgaagtcatg
aggggctaccataaagcccaaatctccttcagagagaaatgcaaagcacaaattcagagg
cagctggagattgttgataaggtgactacagatgaagagctggaggagatgctgcaccgt
gacaatcttgacattttcatttctgatatcaactctggtgcacggatttcaagccaggcc
ctgagtgagattgaatctcgtcatcaggatatcatctgcctcgagtccagcatcaaagag
ctgcacgaaatatttgctgacactgccatgctgctggagattcagggggagttaatcaac
aacatagagaagaatgtgacgagtgctgcagaatatgtcgacatatccaaagcagaaacc
cataaagcagtcacatacaagaaaaaccgatacaagatagcatctctcccgagcttctta
aagaggaaaaccactgctaaaacggctactgatcaaaacacgtcagatttaaaccatgac
tga
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