Larimichthys crocea (large yellow croaker): 104923880
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Entry
104923880 CDS
T04659
Symbol
nfatc2
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X2
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04020
Calcium signaling pathway
lco04148
Efferocytosis
lco04218
Cellular senescence
lco04310
Wnt signaling pathway
lco04370
VEGF signaling pathway
lco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104923880 (nfatc2)
04370 VEGF signaling pathway
104923880 (nfatc2)
04020 Calcium signaling pathway
104923880 (nfatc2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104923880 (nfatc2)
09143 Cell growth and death
04218 Cellular senescence
104923880 (nfatc2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104923880 (nfatc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104923880 (nfatc2)
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
104923880 (nfatc2)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
DUF3971
Motif
Other DBs
NCBI-GeneID:
104923880
NCBI-ProteinID:
XP_010735379
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All DBs
Position
XV:11605159..11622947
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AA seq
901 aa
AA seq
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MTSFYDEKDLEEELSRVNCPDEDLQFEYLFEYEPPCSDFAGGDQDDPNLASHKVLSPESE
QAFPLEEASPYTIKSCSPSYSNHNTEVLAGYDNPEARNYLDSTRPVGLALSPRIEITPSR
EHYNHGRDSLQNHHLNISPRPTLTVPGHDNLAYREPQCLSPASSNSSTSWHSESYSPWAS
PCVSPSSVQNPGDLCPRLQNIHTGSPRTSPGTSPGTSLAEDNCLGPRSPSPRPGSRSASP
QGKRTYDMYRNPGLVPGHRSRSPSPHSGHEDHNIGAHYTHSSLADAMNGFGTGQPGLVPT
KIVKTSNQVYTLYPENHVEGNYLVSCDQDIKTKPAAEPFFVIPPIWPKPLVSSICSIPVA
SLPPLEWPIPRRTDQYELHIEVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQLHGYRGKE
PLGLQIFIGTADERILKPHAFYQVHRITGKTVTTTSYEKIIHGTKVLEIPLEPKNNMKAI
IDCAGILKLRNADIELRKGETDVGRKNTRVRLVFRVHIPQPGGQHVSLQVASHPIECSQR
SAHELPMVEKQDMDSCSVLGGQQMILTGQNFSSDSKVIFMEKTQDGQQIWEMEATVDKDK
SQPSMLFVEVPSYRDTSVCHSVKVNFYVINGKRKRSQPQHFTYTPLASPSIKTEPIDEYE
ADHVGFAIPQILGLSPHSYYHNQRGVLHPDNGLVPALASCQRLGSSIPNQDARFQQQSPA
IVYSRGGKSLSGSPGLYQQTGGMMPDPHRSVLVHTGSPAQSVGPIGAGQHPSIIQFSPTN
HHLLRAGDPQALSAPQPDSQQIIYCDGYSPQSATSLSPTPTQAQAAVTHPQHYPTVIQQQ
SYTQKGQQKGRTPPGTGQMEAPGGGQRRVTVKEENLDQAYLDDVNEIIRKDLTGVQARGQ
T
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgacctctttttacgacgagaaagatttggaggaagagctcagccgggtcaactgtcct
gatgaggatttacagtttgagtacttgtttgagtatgagccaccttgcagcgactttgct
gggggagatcaagatgaccccaaccttgcatctcacaaagtcctcagccccgagtctgag
caggctttccctctggaggaggcctccccttacaccatcaagtcctgcagtccctcctac
agtaaccacaacaccgaggtcctcgcgggatatgacaacccggaggccagaaactatctg
gacagtacccggcctgtaggcctcgccctgagcccgcggatcgaaatcaccccctcccgt
gagcactacaaccatggacgggactccctgcagaaccaccacctgaacattagccccaga
cccaccctcactgtgcccggccatgataaccttgcctaccgtgagccccagtgcctgagt
ccagccagcagcaattcctccaccagctggcactcggagagttactccccctgggcgtct
ccttgtgtgtcccccagcagcgtccagaaccccggagacctctgccccagattacagaac
atccacactggctcccctcgcacctccccgggcacctctcccggcaccagcctagctgag
gacaactgtctaggaccccgctccccttccccgaggcctggctcccgctctgcttccccg
cagggcaaacgcacctacgacatgtacaggaatccgggcttagtccccggacaccgctcc
cgcagtccctcccctcacagcggccatgaagatcacaacataggtgcccactatacgcac
agcagccttgctgatgccatgaatggttttggcaccggtcagcctggcctggtgcccact
aagatagtcaagacgtccaaccaggtttacactctgtacccagagaaccacgtagaaggg
aactacttagtgtcctgcgaccaggacataaaaaccaaacctgctgcagagcctttcttt
gttatccctccaatctggcccaagcctctggtttccagcatctgcagcatccccgtggct
tctcttcccccgttggagtggccgattccccgacgcacagaccagtatgagctccacatc
gaggtgcagcccaagccgcaccacagggcgcactatgagacggagggaagcaggggcgcg
gtcaaagccccgacgggaggacatccagttgtgcagttacatggctacagaggcaaggag
ccacttggcctacagatcttcatcggtacggccgatgagcgaatcctcaagccccacgcc
ttttatcaagtccaccgcatcactggcaagacggtcacgaccaccagctatgagaagatt
atccacggcaccaaagtccttgagatcccgctggagccaaagaacaacatgaaagcaata
atcgactgtgccgggatcctgaagctcaggaacgccgacatcgagctgaggaaaggcgag
acggacgtcgggcggaaaaacacccgagtccgcctcgtgttccgcgtgcacatacctcag
cccggaggacagcacgtctctctccaagtggcctcgcatcccatcgagtgctcccagcgt
tcagcgcacgagcttcccatggtggagaagcaggacatggacagctgctctgtgctcgga
ggccagcagatgatcctgactgggcagaacttcagctccgattcgaaggtcatttttatg
gagaaaactcaggatggccagcaaatctgggaaatggaagcaacagtggacaaagataag
agccagccaagcatgctgttcgtggaggtgccgtcctaccgagacacgtccgtctgccac
tctgtcaaagtgaacttctacgttattaacggcaagaggaagcgcagccagcctcaacat
ttcacctacacgccgctggcatctccgtccatcaagaccgagcctatagatgagtatgaa
gcagaccacgtgggttttgccatcccccagatcttgggtttatcccctcattcctactat
cataaccaacgcggggtgctccatccagacaacggcttggtccccgctctggcttcctgc
cagcgtctcggctccagcatcccgaatcaagacgcacgtttccagcagcagagcccggcc
atcgtctactcccgcggggggaagagtctgagcggcagccctggcctttatcagcagact
ggagggatgatgcccgacccccaccggtcggtcctggtccacaccggctccccggctcag
tccgtaggtcccatcggtgcaggtcagcacccttcaataatccaattctcccccaccaac
caccacctgcttcgggcgggagaccctcaagccctctctgctccgcagcccgacagccag
cagatcatctactgcgacggctactccccgcagtcagccacctccctctcacccactccc
acacaggctcaggctgcagtgacccaccctcagcactatcccaccgtcatccagcagcag
tcgtacacgcagaaggggcagcagaaaggccgcactccgcccggcacggggcagatggag
gctccggggggcggacagaggagggtgacggtcaaggaggagaacttggaccaggcctac
ctagatgatgtgaatgagatcataagaaaggatctgacaggcgttcaggccagagggcag
acatag
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