Larimichthys crocea (large yellow croaker): 104926325
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Entry
104926325 CDS
T04659
Name
(RefSeq) sodium/calcium exchanger 1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04020
Calcium signaling pathway
lco04260
Cardiac muscle contraction
lco04261
Adrenergic signaling in cardiomyocytes
lco04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
104926325
04020 Calcium signaling pathway
104926325
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104926325
04261 Adrenergic signaling in cardiomyocytes
104926325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104926325
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
104926325
Transporters [BR:
lco02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
104926325
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Others
104926325
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
FtsX
DUF4843
Motif
Other DBs
NCBI-GeneID:
104926325
NCBI-ProteinID:
XP_010738458
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Position
XXII:15022767..15044368
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AA seq
945 aa
AA seq
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MFLHKRILNLTPSFTPCMFISMLVLLPGVTHFSQGSASHEDAGGTPGNCSSKNNCSDGVV
LPMWNPQNPAVGDKVARAIVYFAALIYMFLGMSIIADRFMSSIEVITSQEKEITIKKPNG
ETTTTTVRIWNETVSNLTLMALGSSAPEILLSVIEVVGHNFEAGSLGPSTIVGSAAFNMF
IIIAICVYVVPENEVRKIKHLRVFFVTAAWSMFAYVWLYLILSVFSPGEVEVWEAVLTFF
FFPLCVLQAWIADRRLLFYKYVHKRYRADKTRGIIIESEGDAMFTKMDLEMDGQGVNSHT
HPKEALDGMLEGVEEGGGMSAEQDQEEEARRDMARTLKDLKQRHPEKDMEQLIEMANYQV
LVQQQKSRAFYRIQATRMMIGAGNILKKHAADQARKVVSCHEASGQEEDPNTIYLQFEPS
YYQCFENCGSLKLSVTRHGGESGCTVKVDYRTEDATANAGSDYEFAEGTLVFKPGETTKE
FTVGVIDDDIFEEDEHFYVRLSNPRIVHRAEVSVLEPSSITSSNSTVGISSHVPPKAALG
NAHTATVTIYDDDHAGIFTFENNSMRVSESVGNMQVKVHRTSGARGKVAVPYHTVEGTAK
AGEDYEEVSGKLEFQNDETMKLLNVKIIDDEEYEKNKIFTIVLEEPILLEVGQRHGDTND
NKTAVGPEDVSKMGCPCLGEHTKLEVVIEESYEFKSTVDKLIKKTNLALVVGSSSWREQF
VSAVTVSAGDDDEEESGEERLPSCFDYIMHFLTVFWKVLFAFVPPTEYWNGWACFFVSIS
LIGVLTAVTGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAAIQDQYADASIGN
VTGSNAVNVFLGIGVAWTIAAVYWHTKGVPFKVNPGSLAFSVTLFTIMALVCVLVLLYRR
RPTVSGGELGGPRTPKLLTLFMFLSLWFIYILLSSLEAYCHVPGF
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgcacaagcgtatcctgaatttaactccgtctttcacgccatgtatgttcatc
tccatgctggttcttctcccaggcgtcactcatttctcccagggcagcgccagccatgaa
gatgctggcggcacaccaggcaactgctccagtaaaaataactgctccgatggtgtcgtg
ctgcccatgtggaaccctcaaaaccctgcggtgggagacaaggtggcacgtgccattgtt
tactttgcagccctcatttacatgttcctggggatgtccatcatcgcggaccgcttcatg
tcttctatcgaggtcataacctctcaggaaaaagagatcaccatcaagaaacccaacggc
gagacgacgacgacaactgtgcgtatctggaacgagacagtatccaacctgactctgatg
gcactgggctcatctgcaccagagatcctgctgtctgtcatcgaagtggtcggccataat
tttgaagctgggtctttgggtcccagtactatcgtgggcagcgcagcgttcaacatgttc
attatcatcgctatctgtgtctacgtggtgccagaaaatgaagtccgcaagataaagcac
ctgagggtgtttttcgtcactgctgcctggagcatgttcgcctacgtctggctctatctc
atcctgtctgtgttctcccccggagaggtggaggtttgggaggctgtcctcaccttcttc
ttcttccctctttgtgtgctgcaagcctggattgcagaccgacgtcttctcttctacaaa
tacgtccataagcgctatcgtgccgacaagacccgtggaatcatcatcgagtcagaggga
gacgccatgttcaccaaaatggacttggagatggacggccagggtgtgaactcccacact
caccccaaagaggctcttgatgggatgcttgaaggggtggaggaaggtggagggatgagt
gcggagcaagatcaagaggaagaggcccgacgggacatggctcgcacacttaaggactta
aaacagaggcacccagaaaaggacatggagcagctgattgagatggccaactaccaagta
cttgtccaacaacagaagagccgggccttctatcgcattcaagccacgcgcatgatgatc
ggagctgggaacatcttgaaaaagcatgccgctgaccaagccaggaaggtggtgagttgc
catgaggccagcggccaagaggaggatccaaacaccatctacctgcagtttgagccctct
tactaccaatgcttcgagaactgtggctcactaaagctgtcagtgactcggcacggagga
gaaagcggctgcactgtgaaggtggattaccgtacagaggatgcgactgccaacgccggc
tcagactatgagtttgctgagggcactttggtcttcaagcctggcgagacaacaaaagag
ttcactgttggcgtaattgatgatgatatctttgaagaggatgagcacttctatgtgcgc
ctaagtaatccgcgcatcgtgcaccgagctgaggtctccgtcctggagccgagctccatc
acctccagcaacagcacggtgggaatctcttcccacgttcctccaaaggcagccctgggc
aacgctcacaccgccacggttaccatctatgatgacgaccacgctggcatttttacattt
gagaataactccatgagggtcagcgagagcgttggcaacatgcaggtgaaggttcaccgg
acgtccggggcgagggggaaggtggcggtgccataccacaccgtcgagggcaccgccaag
gcaggggaggactacgaggaggtgtccggcaagctggagtttcagaacgacgaaaccatg
aagctgctgaatgtgaagatcatcgatgacgaggagtacgagaagaataagattttcacc
attgtgttggaggagcccatcctgctggaggtgggacagagacacggagacaccaatgat
aacaagacagccgtgggcccggaggacgtgtcaaagatgggatgcccctgcctgggcgag
cacactaagctggaggtagtcattgaggagtcttatgaattcaagagcacagtggataag
ctgatcaagaagacgaacttggctctggtggtggggagcagcagctggagagagcagttt
gttagcgctgtcactgtcagtgcaggtgacgacgatgaggaagagagcggtgaggaacgc
ttgccatcctgcttcgattacattatgcacttcctgacggttttctggaaagtcctcttc
gctttcgtcccgcccaccgagtactggaacggctgggcctgcttttttgtgtccatctcc
ctcattggcgtcctgacagctgtaaccggggacttggcctcccattttggctgcaccatc
ggtctcaaagactcggtcaccgctgtggtgttcgtggccctcggcacctctgttccagat
acctttgcgagtaaagtggctgcaatccaggaccaatacgccgacgcctctatcggcaac
gtgacgggcagcaacgcggtgaatgtgttcctcggcatcggtgtggcgtggaccatcgcg
gccgtttactggcacaccaaaggcgtgccgttcaaggtgaacccgggctccctggccttt
tccgtcaccctcttcaccatcatggcgttggtgtgcgtgctggtgctgctctaccgccgg
cgtcccaccgtgtccggcggagagctcgggggcccacggacacccaagctcctcaccctc
ttcatgttcctctccctctggttcatctacatcctgttgtcctccctggaggcgtactgc
cacgtgcctggcttctga
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