Larimichthys crocea (large yellow croaker): 104927262
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Entry
104927262 CDS
T04659
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04310
Wnt signaling pathway
lco04520
Adherens junction
lco04916
Melanogenesis
lco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104927262 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104927262 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
104927262 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104927262 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104927262 (lef1)
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
104927262 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104927262
NCBI-ProteinID:
XP_019110889
LinkDB
All DBs
Position
X:complement(3908898..3950109)
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AA seq
386 aa
AA seq
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MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPHKEQIFAELSHSEEEGDLADIKSSLVNE
SESSPNSNSHDAARQSQIPQDSYHEKHRDLQEDAKLQDMYSKGHPYSGYPGYIMMSNMND
SSYMNNGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGSHSGHHPQDANNKQ
GMSRHHPGPDMPNFYSLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKH
EPLHETDIMHILYRKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA
INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKMQETAP
GGKRSNFSTCKAKAAATGPLLEMEAC
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgccacagttatcaggcggtggtggtggtggtggtggagacccggagctgtgcgccacg
gatgaaatgatcccgttcaaagacgaaggagacccgcacaaggagcagatcttcgccgag
ctcagccactctgaggaggagggagacctggcagacatcaagtcatctctggtaaacgag
tcagagagcagcccgaacagcaacagccacgatgcagctagacagtcccaaataccgcaa
gattcatatcacgaaaaacacagagaccttcaggaagatgcaaaactccaagacatgtac
agtaaaggccatccatactcgggctacccaggctacatcatgatgagcaacatgaacgac
tcctcgtacatgaacaacggttccctctcgccgcccatgcccagaacgtccaacaaagta
cctgtggtgcagccgtcccatgcagtccacccactcaccccgctgatcacgtacagcgac
gagcacttcgccccgggatcccattccggtcatcacccccaggatgccaacaacaaacaa
ggaatgtcaaggcatcaccctggaccagacatgcccaacttctactccctctctcccgga
ggagtcgggcagatcacgccaccgctgggatggttctcacaccacatggtgcccggcccc
ccaggtcctcacgccacaggaattccccacccggccatcgtcaacccacaggtcaaacac
gagcctctgcatgaaacagacatcatgcacattctttacaggaaaccccagcacgaacag
agaaaggagcaggagcccaaaagaccgcacatcaagaaaccgctaaacgccttcatgctc
tacatgaaagagatgcgcgcgaacgtggtcgccgagtgcacgctgaaagagagcgctgcc
atcaatcagatcctgggacggaggtggcatgctttatctcgggaagagcaagctaagtat
tatgagttagcccgcaaggaacggcagctccacatgcagctctacccaggctggtccgct
cgagacaattatggaaagaagaagaagcggaagagggagaagatgcaggaaacggccccc
ggaggaaaacgtagcaatttctccacatgcaaagcgaaggcagcagctacgggccctctg
ctagagatggaggcctgttag
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