Larimichthys crocea (large yellow croaker): 104927900
Help
Entry
104927900 CDS
T04659
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104927900 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104927900 (ogg1)
Enzymes [BR:
lco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
104927900 (ogg1)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104927900 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
CbiN
Motif
Other DBs
NCBI-GeneID:
104927900
NCBI-ProteinID:
XP_010740384
LinkDB
All DBs
Position
XV:22573691..22576452
Genome browser
AA seq
415 aa
AA seq
DB search
MKTVMAKHAVLSSGVKMWRSLSCAKSELRLDLTLACGQSFRWRETAEGHWTGVMAGRVWT
LTQTDDTVWYHVYKDKGMQGEGCDSKRGAGVSLQMGNKSDKSFKAALKKEEQEEPVAVTS
VHDTEEEEDMLRDYFQLNVKLGDLYEEWGAADPHFKCIADVFTGVRMLRQDPTECLFSFI
CTSNNHISRIQGMVERLCQALGAPLCQLDQTSYHNFPSLSALADSSVEACLRDLGFGYRA
RFLQQSAKQILDTHGLQWLEGLRGVPYVQARDALRTLPGVGTKVADCVCLMSLDKAEAVP
IDTHVWQIAKRDYNYASGNAQKSITDKLHRDIGDFFRKLWGPYAGWAQSVLFCADLKKFQ
KLKEMPDLKQPLKEEKGGGKMRVAYKKTKIKTEEDETVKAMETKSAGRKKAKVSV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagttatggccaagcatgcagtgctgtcatcgggggtcaaaatgtggagatct
ctgtcctgtgcgaagtcagagctgcgcctggatctcactctggcctgtggacagtctttc
cgctggagagaaactgcagaaggccactggacaggagtgatggcaggacgagtttggact
ctgactcaaacggatgacactgtttggtaccatgtttacaaagacaaaggcatgcagggg
gagggatgtgacagcaagaggggagctggtgtttctctccagatgggaaacaagtcagac
aagagcttcaaagcagctttgaaaaaggaggagcaggaggagccggtggctgtgacttca
gtgcacgacacagaggaggaagaagacatgctgagagattacttccagctgaatgtgaag
ctgggagatctgtacgaggagtggggagcagcagatccccactttaaatgcattgcagac
gtcttcacaggtgtgcgaatgctgcgccaggaccccaccgaatgcctgttttccttcatc
tgtacctccaacaaccacatctctcgcatccagggcatggtggagaggctgtgccaggct
ctgggtgccccactgtgccaactggatcaaacctcttatcacaactttccttccctttct
gcgcttgcagacagcagtgtggaggcgtgtctcagggatctcggttttggatacagggct
cgcttccttcagcagagtgcaaagcaaattttggacacccacgggctccagtggcttgaa
ggtctacgcggtgtcccgtatgtgcaggcccgtgatgctctgcgtaccctccctggtgtg
ggcaccaaggtggcagactgtgtatgtctgatgtccctggataaggcagaggccgtcccc
atagacacacacgtgtggcagattgcaaaacgtgattacaactatgcttctggcaacgca
caaaaaagcatcacagataaactccacagagatattggggattttttcagaaagctttgg
ggtccttatgctggctgggcacagtcggtgttattctgtgcggaccttaagaagttccaa
aagctgaaagaaatgccagatctgaagcagccactgaaagaggaaaaaggtggaggaaaa
atgagggtagcatacaagaaaacaaaaattaagacagaagaagatgaaactgtgaaggcc
atggaaactaagtcagcaggtcgcaagaaagcaaaggtgtctgtctag
DBGET
integrated database retrieval system
