Larimichthys crocea (large yellow croaker): 104939484
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Entry
104939484 CDS
T04659
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104939484 (snapc4)
03021 Transcription machinery [BR:
lco03021
]
104939484 (snapc4)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
104939484 (snapc4)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
104939484 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
104939484
NCBI-ProteinID:
XP_019133747
LinkDB
All DBs
Position
XI:20195501..20207848
Genome browser
AA seq
1720 aa
AA seq
DB search
MSVSLSAERDRIQRQVEELEQILSVTNTDMELLSSETDDESADDDTEEEGKSAAGLLAQR
AKIQQEIQNLETILGPHSPVCVSDDDSSSESELGLSASVDSCLQMNLVYQQVVQETLDQL
ETLLDQNHRQQKEVTSQLSGPIKESSREPGPPSSCQQPINMFLGRFFKPYFKDKLTGLGP
PANEETKLKTVRMSGCLENKKLKVKRWASWQKTLLIDSVSRDGLRRLIQPKLSRVDYLTQ
KLSSAEETDRQQLREQIDSLEREIDLLREKKEEELIGDRYEEHDWQRISNIDFEGTKEAE
DLRSFWQNFLHPSINKSSWSQQEVEELKEVSRRHGERDWESIAEELGTGRTAFLCLQTFQ
RFVSDSLRRGSWTPSEDALLRELVDKMRIGNFIPYSQMSYFMEGRDPSQLLYRWAQALDP
SLKRGPWTPDEDQLLLQAVSRYGEKDWWKIRFEVPGRTDSSCRDRYYDCLKEDIKRGPFD
KKEQLLLLMLVKKHGVGRWAKIAAEIPHRLDAQCLREWRKLSKTLPLPAQKHGGKKTPTT
NDGEAKTKEKIKVAQTRRSLKTRLKKVKEKEEQEETSDEEEEALVEYMDSDEEKKKVKKA
MGVLRSEELEEEEKAYDFPPIQEWTSTDAQSFTFLSFRPVELPSSGDAYKGKPVRSTILG
DFGQSVVIGPPPRDLQWYKRHSSNTMMMVSPEQLQAYLQVQMNTFDNLNGKVQTGKRNLP
EVTGGGLDYELQAAVTPWIGNLLIPAKTRLTATDALRERGEKTPLSSTSVFLIFIQTLNV
DSEGCKKMIQQRKNKVMSSILHSGNTINLNTVAGMLEKKRLVNKQQDKLILAQRGVLHHK
DKQKHQPRQLALLQQPPLLCPPSMPPQHLLQVPPKMHPQMSPVSLFSHPASTQLMPATSL
TSTSPCRPPPAVVTSMLPSSPHRLNAPPVIVVQMPLNTTSTCSASFHQLPRLAPAPSINQ
HVSIGSTPPSQNAVSSISSIPITFSSQPSPALSPSSSIQNPLKDTQEDQQAVCGSQNEVD
LGAAGNDVGEACPGMDRAGNGVIKEDRRIRKPSLKAKSPQDTAKAKAKAQKKAASSPCRK
IQIQNMNSPSQPVGTTPINPVPQTSQRPSPPLVVLPPPTKPDTPSLPVSVNSSQITTPAS
CSDRTVSAAPPPSISTNQHAAYATLSLQTPLHNDHDYTFTPSLVSDDSQHGFNSDPPIPT
PKQPNQHGSDSTPTKKNPKAPPSGRKRAREEQPSVTSSQDDQCVGGAGHVVGRTGDVLGG
AGTGVTQEGRRRRKPSEKVRTLQGAVKTQQAEAKKKKSLSSPPWKKRSCTSRSKQEVVIQ
NPPLTPLPSFCLCPGQSMWVMTPHGLIQLADAPPQGLQLALVPALLGNSNGQQATPPLPL
PADSLAAPQPAAPQPAPQSAAPQPPPVLVLENLPGQNQSRLLPAPLSCPEPVPRPIILQP
VSNPGAPELHPKLILPYKGTVKADHSVPPPLQREALQFDPSLMFRESQKEVHDWLSSQRG
VVVPGVGVAFPYLPPFVSSLSTLNALLQARTSLTESTLQLLSRESEPRHPQIDPDSTKTT
SSPDLPDSTTDCKPATDNTAPSVDLQEEVELVVTVRQLVAERFSGNPAYQLLKARFLSCF
TVPALLATVQPVTKKIVEKKASQGEEEEEEEQRVIERVKQRRAARSVLLSDGAGVPANHF
SGIITTDQTGSEQTGSEQTGPDQIGSDQTGSEQTGLDWTS
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctctctgtcagcagagagagacaggatccagcgacaggtggaggagctggaa
cagattctgtctgtaaccaacactgatatggaactgctgagcagtgagacagacgatgaa
tcagctgatgatgacacagaggaggaggggaagtctgcagcaggtctgttggctcagaga
gcgaagatccagcaggagatccagaacctggagactatcctggggccacacagccctgtc
tgtgtgtcagatgacgacagcagcagtgagagtgagctgggtctgtcggcgtccgtggac
tcgtgtcttcagatgaacctggtctaccagcaggttgttcaggagactttggaccaactg
gagacactcttggatcagaaccacagacagcagaaagaggtgacgtcacagctgtctgga
ccaatcaaagagtcttcaagggaaccgggcccaccctcctcctgccagcagccaatcaac
atgttcctgggacgattcttcaaaccgtacttcaaggataagctgacgggactgggtcct
ccagccaatgaggagacgaagctgaagacagtgaggatgagcggctgtttggagaacaag
aagctgaaagtcaaacgctgggccagctggcagaagactctgttgattgactcagtctcc
agagacggactaaggagactgatacaacccaaactgtccagggtggactacctgacgcag
aagctgtcgtcagcagaggagacagacaggcagcagctgagagagcagatcgacagtctg
gagagagagattgacctcctcagagagaagaaggaggaggagctgatcggtgatcgatat
gaagaacacgattggcagagaatctctaatattgactttgaaggcacaaaagaggcggag
gacctccgtagtttctggcagaacttcctccacccgtccatcaacaagtcttcatggagt
cagcaggaggtggaggagctgaaggaggtcagcaggaggcacggagagagagactgggag
agcatcgctgaggagctggggacggggaggacagccttcctgtgtcttcagacgttccag
cggttcgtctcagactcgttacggaggggcagttggactccgtctgaagacgctctgctc
agagaactcgtcgacaagatgaggattggaaacttcatcccctactcacagatgagttac
ttcatggagggtcgtgacccaagtcagctgctctacaggtgggctcaggctctggacccg
agcctgaagagaggtccgtggacgcccgatgaggaccagctgctgctgcaggccgtctct
cgttatggtgagaaggactggtggaagatccggttcgaggttcctggacgtactgacagc
agctgcagagacaggtactatgactgtctgaaggaggacataaagagaggaccgtttgac
aaaaaggagcagctgttgctgctgatgctggtgaagaaacatggagttggtcgctgggcg
aagatcgctgcagagattcctcatcgtttggacgctcagtgtcttcgagagtggaggaaa
ctcagcaaaacacttccacttcctgctcagaaacatgggggtaaaaaaacaccaaccacc
aacgatggagaagcaaagacgaaggagaagattaaggttgcacagacccggagaagcctc
aagacacgactgaagaaagtgaaggagaaagaagagcaggaggagaccagcgatgaggag
gaggaggcattggtggagtacatggacagtgatgaagagaagaaaaaagtaaagaaggcc
atgggagtattgaggagtgaggagttggaggaagaggagaaggcgtatgacttcccccct
atacaggagtggacttcaacagacgcacagagtttcaccttcctgagctttcgaccggtg
gagctgccttcctctggagatgcctacaaggggaaacctgtgaggtcaaccatccttgga
gactttggacagtccgtggtaattggacctccacccagagacctgcagtggtacaaacgc
cacagcagcaacaccatgatgatggtatcacctgaacagctgcaagcctacctccaggtc
cagatgaacacgttcgacaacctcaatgggaaggtgcagactggcaaacgtaacctacca
gaagtgacggggggagggttggactacgagctgcaggctgcggtgacgccttggatcggt
aacctcctgatcccggcaaaaaccagactgacagcaaccgatgctctgagggagcgagga
gagaagaccccactgtcctcgacgtccgtattcctgatcttcatccagaccttgaacgtg
gactctgaaggctgtaagaagatgatacagcagaggaagaacaaggtcatgtcatcaata
ctgcactctggaaacacgattaacctaaatacagttgcaggaatgttggagaagaagcgt
ttggtgaacaagcagcaggacaaactgatcctggcgcagcgtggggtgctgcaccataaa
gacaaacagaaacatcagccacgacagcttgcactgctgcaacaacctcctcttctctgc
cccccatcaatgcctcctcagcatcttcttcaggtgcctcctaaaatgcatcctcagatg
tctcctgtgtccctattttctcatcctgcctccacccagctaatgcctgccacgtcgctg
acctcgacttctccatgcagacctcctcctgcggtggtcacctctatgttaccttcttct
cctcatagactgaatgccccccctgtcatagtggtccaaatgcccctgaacactacatct
acctgctctgcttctttccaccaattacctagacttgccccagccccctccatcaaccag
catgtttctattggttcaacaccgcccagtcagaacgcggtttcctcaatctccagcatt
cccatcactttctccagccagcctagtcctgccctcagtccatccagctccatccagaat
ccactcaaagacactcaagaggatcaacaggccgtctgtggcagtcagaacgaggtggat
ttgggtgccgcaggtaatgatgtaggtgaagcatgtccaggcatggacagggcaggtaac
ggtgtgatcaaggaagacagaaggatccggaagccaagtctgaaggccaaatctccccag
gacaccgccaaagcaaaggctaaagctcagaagaaagctgcttcatctccatgtcggaaa
attcagatccagaacatgaactctccttctcagccggttgggaccactcccataaatccg
gtacctcagacttctcaaagaccgtctcctcccttggtcgtcctccctcctccaaccaaa
ccagacactccttcacttcctgtctctgtgaactcgtcccagatcaccacacctgcctcc
tgctctgataggactgtgtcagcagccccgcccccctctatatccaccaatcagcacgct
gcctacgccactttaagcctacaaactcctttacacaacgatcatgactacacctttaca
ccaagtcttgtctctgatgacagtcaacatggcttcaactccgatccaccaatccccacc
cccaaacagccaaaccagcatggctctgactccacccccacaaaaaaaaatcctaaagcc
ccgcccagtgggaggaaacgagcaagggaggagcaaccgagtgtgacgagcagccaggat
gatcagtgtgtgggtggggcaggtcatgtggtgggcaggacaggtgacgtgttggggggg
gcaggtacaggtgtgacccaggaaggaaggaggcgtcgtaagccgagtgagaaggtcaga
actcttcagggagctgttaagacccaacaggctgaagccaagaaaaaaaagagtttgtct
tctcctccttggaaaaagcgctcttgtacgtctcgctctaaacaggaagttgtcatccag
aaccctccacttactccgctgcccagcttctgtttgtgtcctggtcagtccatgtgggtc
atgactcctcatgggctgatccagttggcagatgccccgcctcaaggcctgcagctggca
ttggtcccagctctactcgggaatagtaacggtcagcaggccacgccccctctgccccta
cctgcagacagtctagccgcacctcaaccagccgcacctcaaccagcccctcaatcagcc
gcacctcaaccccccccagtgttggtcctcgaaaacctgcctggacagaatcagtcacgc
cttcttcctgcccctctttcctgtcctgagcccgtcccccgacctatcatcctgcagcca
gtctcaaacccgggcgcccctgagcttcacccaaaactcatcctgccatataagggcact
gtcaaagcagaccattcggtaccccctcccctccagagggaggcattgcagttcgacccc
tccctgatgtttcgagagtcccagaaagaggtgcatgattggctgagcagtcagcgaggg
gtggtggtacctggagtgggcgtggcttttccctacctgccacccttcgtcagcagtctg
agcacgctcaatgcactgctccaagccaggacgtctctgactgaatcaacccttcagctg
ctgagtcgagagtccgaaccccgacacccccaaattgaccctgacagcaccaagaccacg
tccagtccggacttgccagattccacgaccgactgtaaaccagctacagacaacacagct
ccctctgtcgacctgcaggaggaggtagagctcgtggtgacagtgcgtcagctggtggca
gagcgtttctcaggtaaccctgcctaccagctgctgaaagcccgcttcctgtcctgcttc
actgtccctgccctcctggctactgttcagccagttaccaaaaagattgtggagaagaag
gcgtcacaaggagaggaggaggaggaggaggagcagagagtcatagagagagtgaaacag
aggagagctgccagatctgtactgctgagtgacggcgcaggagttccagccaatcacttc
tcaggaatcatcaccacagatcagactggatcggaacagactggatcggaacagactgga
ccagaccagattggatcagatcagactggatcagaacagactggactggactggaccagt
tga
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integrated database retrieval system
