Lysobacter capsici: LC55x_4742
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Entry
LC55x_4742 CDS
T04162
Name
(GenBank) autotransporter-associated beta strand repeat family protein
KO
K19231
fibronectin-binding autotransporter adhesin
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_4742
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_4742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Motif
Other DBs
NCBI-ProteinID:
ALN87990
UniProt:
A0A0S2FWY2
LinkDB
All DBs
Position
complement(5241521..5248042)
Genome browser
AA seq
2173 aa
AA seq
DB search
MPARAQRRLRFHPLSLGVAQAIPLLIALQFYSGQAAAACTPAVPVDGDNVSCTGAPILLP
PNPNSFLSNANNLNVTVQSGAVMSTLPGGTAMTLGGNNITLNNLGAIDANAAGSLVLARA
LTIGNLIAPASGNVTVNNQGSIEGTFDGTFGLLGTAMVVANSGTTTVTNSGSIGVSALGL
FDPVNSIAVAIYGGGNVNFTNTGTITGRVAFASPGSGGNTFVNAGTINGSVSLGTTLSND
TFVAVTGSSLANPLIPLPPVGVPTPTLPPGLLTFAATGTVDAGIGGSDTLVLQNTVAGPG
SGTGGTGSISGLQYLNFENLTVNSGTWTLSGAVVSGGATLNGGLSIFDNSLSFGLGPLTA
NGGAIQASLPGLTLAQNVNLTGGLIVQGANALSLGGTLSGAGGLIKNGAGTLSLLGNNNF
SGGLALNGGGLTLGSAGSLGTGLFLVGGPATLNTAFTGTLTNQVQLNGALTLNGAGALTL
GGNIGGAGSLTLNSGALALTGSNNYSGGTVLQAGSIDVGNSGALGTGALTVNGAGSLTGA
AGVALNNAIVLNNTLNFGAGGGGGALTLNGGISGAGGISLAGAPGLTLNGANSFNGGFNL
GGGSLVVGNNTALGSGAVTVSGAGTLDANAAVSLSNNFNLNAGLGIGGSANLALNGTIGG
LGGLTKNGAANLTLGGANAFAGGLNLQGGGLSVGTNTSLGLGALTVNGAATLNANAGVNL
GNAVVLNAGLGIGGANDIALGGLVSGAGGLAFNGSGTLALNGANNFAGGVDLASGSLSVG
NNLALGLGGLNVSGSANLSAGLPGIALANNVTLGAGATLGLGGANALNLGGAIGGAGGLS
INGPGSFTLGGANSFGGGVSLGAGNLLLGGSASLGTGALNVTGNASLASTGAALNLGNAI
NLGAGAGLSLGGAADLSLGGAIAGGGSLIKTGAGALSLNGANSFGGGLDLQAGTLNVGTD
TALGSGALAVNGAATLNAGAAVNLGNAINLNAALNLGGANNLGLNGAIAGAGGLSFNGPA
TLSLGGSNSFGGGVNLGGGSLSVGTNTALGSGALNVGGNANLSASAPGIALGNAVNLGAG
VTLGINGGNDLSLGGGIGGAGGLAMSGTGALNLGGANSFGGGVALNAGTLGVGNNLALGT
GALNVGANAGLTATAPGIALGNGIDLAAGAQLGIGGGNDLSLGGTIGGAGSLGFNGTGTL
SLGAANTFSGGFNLGAGTLALGNAGALGSGALNIGGNANLSAGLPGLALANAVNIGAGSA
LSIVGANSLDLNGTVAGSGTLIKTGAGALGLNGAVLGFTGGLSIQGGTLSVANPITAGLA
SAAGTTANFSAGVDNLSVTGAVAGAVNLGGGDDVLSAAPTQLAGLTGAINAGAGSDTFSV
VGSGEGTLPGAALSGFENLGVGAGGTLILPAGATGAFDNTAVGGNLVLNGNLGGNANVAA
GGALIGDGALAGALTLGGVLAPSGVAGGSGAAAGTAAAGASLNVASLTVNPGASLQLRQT
GAGATDSVIVAGAASLNGGQVVAIPQAGSYAPVTDYRIVDAGTLSGAFSGVSQTALPFLD
ASLVTIGNDVFLRLSEHDAGGTGIRFNQFPGLSGNQQSVANALQAIADAATPRLPTLIAA
ARGLSAAQAPRAFDTLSGETYGSIVSAQRYNAEQMQRSVARQLDRARDAGTEDESTLGTL
WATAYGGRAEFDGDGLDGIDNTVGGIAIGLEGSPGEHFRFGGHIGMAHSKMETDRRDDKV
DGDLFNVGIHWLYAPGGFWTQGAAGYSYASFDAEREIAVGTFNRRSDAHFSNDGVYGMLE
AGWRWDGASVRVEPLIGVYYNKVESVTFTERGAGDANLIVSTGSFDTTTAGIGVRFSGVP
GSAARKLTPTADIRYLHDLQDDQPFARNAFAGATVPGFGVSGFAAERNRWNVGLGLAYRM
SPVSSGFIEYRGDIGSDDRAHSLNVGLRLGWGGSSAVAAARAAPVTARMAAAERASGDSG
AIDAASARDPAVSVSGSRSAGPAAAAATAAGAAAAAISAERSAGSAGAAANDSASGASGS
GAVGAAASGSNASASHAAQSAGAAAGAVAASEAGAATRSGVQPAAQNAAFGQCKVRPAAK
AAAPRTVAKAKAKPRSARPISKTQRVASRGTGTQASKRRPAPRLAAVTSRPAPPSGAMTQ
PTTWCDEASARAQ
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgcgcgcaacgtcgtcttcgctttcatcccctgagcctcggcgtcgcgcaa
gcgattccgcttctgatcgcgctgcagttctacagcggccaggccgctgcggcctgcacg
ccggccgtgccggtggacggcgacaatgtcagttgcaccggcgcgccgatcctgctgccg
cccaaccccaattcgttcctgagcaacgccaacaacctcaacgtcaccgtgcagtccggc
gcggtcatgagcacgctgcccggcggcaccgcgatgaccctgggcggcaacaacatcacc
ctcaacaacctcggcgcgatcgacgccaacgccgccggttcgctggtgctggcgcgcgcg
ctgaccatcggcaacctgatcgctccggccagcggcaacgtcaccgtcaacaaccaaggt
tcgatcgaaggcaccttcgacggcaccttcggcctgctcggcacggcgatggtggtcgcc
aacagcggcaccaccaccgtcaccaactccggcagcatcggcgtcagcgcgctgggcctg
ttcgacccggtcaattcgatcgcggtggcgatctacggcggcggcaacgtcaacttcacc
aataccggcaccatcaccggccgggtcgccttcgccagccccggcagcggcggcaacacc
ttcgtcaatgccggcaccatcaacggcagcgtctcgctcggcaccaccttgagcaacgac
accttcgtcgcggtcaccggttcctcgctcgccaatccgctgatcccgctgccgccggtc
ggcgtgccgacgccgaccttgccgcccggtctgctcaccttcgccgcgaccggcacggtc
gatgccggcatcggcggcagcgataccttggtgctgcagaacaccgtcgccggccccggt
tcgggcaccggcggcaccggttcgatctccggcctgcaatacctcaacttcgaaaacctc
accgtcaacagcggcacctggaccttgagcggcgcggtcgtcagcggcggcgccacgctc
aacggcggcctgtcgatcttcgacaactcgctgtcgttcggcctgggcccgttgaccgcg
aacggcggcgcgatccaggcctcgctgcccggtctgacgctcgcgcagaacgtgaatctg
accggcggcctgatcgtgcagggcgcgaacgcgctgagcctgggcggcacgctcagcggc
gccggcggtctgatcaagaacggcgcgggcaccttgtcgctgctcggcaacaacaacttc
agcggcgggctcgcgcttaacggcggcggcctgaccctgggcagcgcgggttcgctcggc
accggcctgttcctggtcggcggaccggccacgctcaacaccgcgttcaccggcacgctg
accaatcaggtccagctcaacggcgcgttgacgctcaacggcgcgggcgcgctgaccctc
ggcggcaacatcggcggcgccggcagcctcaccctcaacagcggcgcgctggcgctgacc
ggcagcaacaactacagcggcggcaccgtcctgcaggccggttcgatcgatgtgggcaac
agcggcgcgctcggcaccggcgcgttgaccgtcaacggcgcgggctcgctgaccggcgcg
gccggcgtcgccttgaacaacgcgatcgtgctcaacaacaccttgaacttcggcgccggc
ggtggcggcggcgcgttgaccctcaacggcggcatcagcggcgcgggcggaatcagcctg
gccggcgcgccgggactgacgctcaacggcgccaacagcttcaacggcggattcaatctc
ggcggcggctcgctggtggtcggcaacaacaccgcgctcggcagcggcgcggtcacggtc
agcggcgcgggcaccctggacgccaacgcagcggtcagcctgagcaacaacttcaacctc
aacgccgggctcggcatcggcggcagcgccaatctcgcgctcaacggcacgatcggcggc
ctgggcggcttgactaagaacggcgcggccaacctcaccctcggcggcgcgaacgccttc
gccggcggcttgaacctgcaaggcggcgggctgagcgtgggcaccaacacttcgctcggg
ttgggcgcgttgacggtcaacggcgcggcgaccttgaacgccaatgccggggtgaatctc
ggcaacgcggtggtgctcaacgccggcctgggcatcggcggcgccaacgatatcgcgctc
ggcggattggtcagcggcgcgggcggactggccttcaacggcagcggcacgcttgcgctc
aacggcgccaacaatttcgccggcggcgtcgatctggccagcggcagcttgagcgtcggc
aacaatctagcgctcggtctgggcgggctcaacgtcagcggcagcgcgaacctgagcgcg
ggcttgcccggcatcgcgctggccaacaacgtcactctcggcgcgggcgcgaccctgggc
ctgggcggcgcgaacgcgctcaatctcggcggcgcgatcggcggcgcgggcggtctgtcg
atcaacggtccgggcagtttcactctcggcggcgccaacagcttcggtggcggcgtgtcg
ctgggcgcgggcaatctgctgctcggcggcagcgcttcgctcggcaccggcgcgctcaac
gtcaccggcaatgcgagcctggccagcaccggcgcggcgctcaacctgggcaacgcgatc
aatctcggcgcgggcgcgggtctgtcgctcggcggcgcggccgatctgagcctgggcggc
gcgatcgccggcggcggttcgctgatcaagaccggcgcgggcgcgttgtcgctcaacggc
gccaacagcttcggcggcggactggatctgcaggccggtacgctcaatgtcggcaccgac
accgcgctcggcagcggcgcgctcgcggtcaacggcgcggccacgctcaacgcgggcgcg
gcggtgaacctgggcaatgcgatcaatctcaatgcggccttgaacctcggcggcgccaat
aacctgggcttgaacggcgcgatcgccggcgcgggcggattgagcttcaacgggccggcg
acgctgagcctgggcggcagcaacagcttcggcggtggcgtcaatctcggcggcggttcg
ctgagcgtcggcaccaacaccgcgctcggcagcggcgcgctcaatgtcggcggcaacgcg
aacctgagcgcgagcgcgccgggcatcgcgctgggcaacgcggtcaatctcggcgcgggc
gtgaccttgggcatcaacggcggcaacgatctgtcgctcggcggcggcatcggcggcgcg
ggcggtctggcgatgagcggcacgggcgcgttgaacctcggcggcgccaacagcttcggc
ggcggcgtcgcgctcaacgcgggcacgctgggtgtcggcaacaacctcgcgctcggcact
ggcgcgctcaacgtcggcgcgaacgcgggcttgaccgcgaccgcgccgggcatcgcgctc
ggcaacggcatcgacctcgccgcgggcgcgcaactgggcatcggcggcggcaacgacctc
agcctcggcggcacgatcggcggcgccggcagtctgggcttcaacggcaccggcaccttg
tcgctgggcgcggcgaatactttcagcggcggcttcaatctcggcgcgggcaccctggcg
ctcggcaacgccggcgcgctcggcagcggcgcgctcaacatcggcggcaacgcgaatctc
agtgccggcttgccgggactcgcgctcgccaacgcggtcaatatcggggccggcagcgcc
ttgagcatcgtcggcgcgaatagcctggacttgaacggcacggtcgccggcagcggcacg
ctgatcaagaccggcgccggcgcgctcgggctcaacggcgcggtgctcggtttcaccggc
ggcctgtcgatccagggcggcacgctcagcgtcgccaatccgatcaccgccggtctcgct
tcggccgcgggcacgaccgcgaacttcagcgccggtgtcgacaacctcagcgtgaccggc
gcggtcgccggcgcggtcaatctcggcggcggcgacgatgtgttgagcgccgcgccgacg
caactggccggccttaccggcgcgatcaacgccggcgcgggcagcgatacgttctcggtc
gtcggcagcggcgaaggcacgctgccgggcgcggccttgagcggtttcgaaaacctcggc
gtcggcgcgggcggcaccttgatcctgccggccggcgcgaccggtgcgttcgacaacacc
gccgtcggcggcaacctcgtgctcaacggcaacctcggcggcaacgcgaacgtcgccgcg
ggtggcgccttgatcggcgacggcgcactggccggtgcgttgaccctgggcggcgtactc
gcgccgtccggtgtcgccggcggcagcggcgcggcggcgggcacggccgcggccggcgct
tcgctcaatgtcgccagcctgaccgtcaaccccggcgccagcctgcaactgcgccagacc
ggcgcgggcgcgaccgacagcgtgatcgtcgccggcgcggcgagcttgaacggcggccag
gtggtggcgattccgcaagccggcagctacgcgccggtgaccgactaccgcatcgtcgac
gccggcaccctcagcggcgcgttcagcggcgtcagccagaccgcgttgccgttcctcgac
gcgagcctggtgacaatcggcaacgacgtgttcctgcgcctgagcgagcacgatgccggc
ggcaccggcatccgcttcaatcagttccccgggctcagcggcaatcagcaatcggtggcc
aacgcgctgcaggcgatcgccgatgccgccacgccgcggttgccgaccctgatcgcggcc
gcgcgcgggctcagcgccgcgcaggcgccgcgcgcgttcgacaccctcagcggcgaaacc
tatggttcgatcgtcagcgcgcaacgctacaacgccgagcagatgcaacgcagcgtggcg
cgccagctcgatcgcgcgcgcgatgccggcaccgaggacgaaagcacgctcggcacgctg
tgggcgaccgcgtacggcggccgcgccgagttcgacggcgacggcctggacggcatcgac
aacaccgtcggcggcatcgccatcggtctggaaggctcgcccggcgagcacttccgtttc
ggcggccacatcggcatggcccattcgaagatggaaaccgaccgccgcgacgacaaggtc
gacggcgatctgttcaacgtcggcatccactggctgtacgcgccgggcgggttctggacc
cagggcgcggccggttacagctatgccagcttcgacgccgaacgcgagatcgcggtgggc
accttcaaccgtcgcagcgatgcgcatttcagcaacgacggcgtgtacggcatgctcgaa
gccggctggcgctgggacggcgccagcgtgcgcgtggagcccttgatcggcgtgtactac
aacaaggtcgaatcggtgaccttcaccgaacgcggcgcgggcgacgcgaacctgatcgtg
tccaccggcagcttcgacaccaccaccgccggtatcggcgtgcgtttctccggcgtgccc
ggcagcgccgcgcgcaagctcacgccgaccgccgacattcgttatctgcacgatctgcag
gacgatcaaccgttcgcgcgcaacgccttcgccggcgcgaccgtgccgggcttcggcgtg
agcggcttcgcggccgaacgcaatcgctggaacgtcggtctgggtctggcttatcgaatg
agcccggtcagcagcggcttcatcgagtatcgcggcgacatcggcagcgacgatcgcgcg
cattcgctcaatgtcggcctgcggctgggttggggcggttcgtcggcggtcgcggcggcg
cgcgcggcgccggtgaccgcgcgcatggcggcggcggagcgtgcttcgggcgatagcggt
gcgatcgatgcggcatcggcgcgcgatcccgccgtgtcggtttcgggctcgcgttcggcc
ggtccggcggccgcggccgcaaccgcggcaggcgccgcggcggcggcgatttcagccgaa
cgttcggccggttcggcgggcgcggccgcgaatgattcggcatcaggggcgagtggatcg
ggagcggtgggcgcggcggcgtccggatcgaatgcgtcggcatctcatgccgcgcagtcg
gccggcgctgccgcgggtgcggtggccgcatccgaggcgggcgctgcgacgcgcagcggc
gttcaaccggccgcgcagaacgccgcattcggtcagtgcaaggttcgccccgccgccaag
gccgcggctccccgaacggtcgcgaaagccaaggccaagccgcgtagcgcgcgaccgatc
tccaagacccagcgtgtcgcctcgcgcggcaccggaacccaggcgagcaagcggcgtccc
gcgccgcgactcgccgccgtgacatcgcgacccgcccctccgtcgggcgcgatgacccag
ccgacgacgtggtgcgacgaggcttcggcccgggctcaataa
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