Lactobacillus crispatus: LCRIS_00987
Entry
LCRIS_00987 CDS
T01222
Gene name
aspS
Definition
(GenBank) Aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LCRIS_00987 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcr01007
]
LCRIS_00987 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcr03016
]
LCRIS_00987 (aspS)
03029 Mitochondrial biogenesis [BR:
lcr03029
]
LCRIS_00987 (aspS)
Enzymes [BR:
lcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LCRIS_00987 (aspS)
Amino acid related enzymes [BR:
lcr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LCRIS_00987 (aspS)
Transfer RNA biogenesis [BR:
lcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LCRIS_00987 (aspS)
Prokaryotic type
Other AARSs
LCRIS_00987 (aspS)
Mitochondrial biogenesis [BR:
lcr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LCRIS_00987 (aspS)
SSDB
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
DUF4131
Other DBs
NCBI-ProteinID:
CBL50434
UniProt:
D5H349
LinkDB
Position
992690..994543
AA seq
617 aa
MEKIEKRTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGK
KLMDIADSLGNEYVVQVKGKVVKRSEVNPDMKTGQVEVDATEIIILNKAKNPPFEIKDGI
EVSEQTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGAR
DYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDM
EMSFADEETIQSYTEGLLKKIMKDVKGFDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIH
DLSPIFKDSDFKVFSGAIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAWVK
FEDGEFSGPVARFLTDENKEALKKEFDLEGGELVVFVADKWKVCCDSLDHLRREFAKETG
IVPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHARSYDIV
MNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLAIGLDR
FAMMLADKDNIRDVSAFPKNASASEPMMHAPAPVADQQLADLGIEVEEKYQDSVKATEER
LEKMAAEDAAENSTWDK
NT seq
1854 nt
+upstream
nt +downstream
nt
atggaaaagatcgaaaaaagaacagattattgtggcaatattactgaaaaatacatcggt
caagatgtaaatctctatggttgggtacaacgtgtacgtaacttaggtaacttggttttc
atcgatttgcgtgaccgtgaaggcttggttcagatcgttgttaacaaagattctggtaag
aagttaatggatattgccgattcacttggtaatgaatatgttgttcaagttaaggggaaa
gttgttaagcgttcagaagttaaccctgacatgaagactggtcaagttgaagttgatgca
actgaaatcattattttaaacaaggctaagaaccctccatttgaaattaaagatggaatt
gaagtctcagaacaaactagattaaagtatcgctatcttgatcttcgccgtccagaagtt
caacaagcaattattttacgttcaaagattttgcgtgctactcatgaattctttgatgaa
aatggttttattgatattgaaactccaatcttaggtaagtcatcacctgaaggtgcacgt
gactacttagtaccatcaagaatctatccaggtagtttctacgctttgccacaatcacca
caactgttcaagcagcttttaatgggtgcaggatttgacaagtattaccagttagctcgt
tgtttccgtgatgaagacctacgtggtgaccgccaaccagaatttactcaaattgatatg
gaaatgtcatttgctgatgaagaaactattcagagttatactgaaggtcttttgaagaaa
attatgaaagatgtcaagggctttgatcttaaaactccaattaagcgaattacttggact
gattcaatgaacaagtatggctgtgacaaaccagatactcgttacggtatgttgattcat
gacttaagcccaattttcaaggatagtgactttaaggtcttctccggtgcaattgctgat
ggcggttttgttaagggaattgctgttaaaaatggtgcaaaagaatactcacgtaagaag
attgacaagaaggctgactttattaaacgtttccacgctaaaggtttggcttgggttaaa
tttgaagatggcgaattttcaggccctgttgctcgcttcttgactgatgagaacaaagaa
gctttgaagaaggaatttgatcttgaaggcggcgaattagtagtattcgtagctgataag
tggaaggtatgttgtgattcacttgaccaccttcgtcgtgaatttgccaaagaaactggt
attgttcctaagggtgtttatgactttgtttgggttgttgattggccattatttgaatac
gatgaaggacttggccgttgggtagcagctcaccacccattcactatgccagatgatgaa
ggggttaagttgctaactactgaacctcataaggctcacgcacgtagttatgatattgtt
atgaatggtgatgagatgggcggtggctcaatccgtatccacaagcgctcaattcaagaa
aatatgtttaaggcacttggtttcactaagaaacgtgcatatgaacaatttggttacttg
atggatgctttggacatgggcttcccacctcacgcaggtttagctatcggtcttgatcga
tttgcaatgatgcttgctgataaggataatattcgtgacgtttcagcattccctaagaat
gcttctgcttcagaaccaatgatgcatgctccagctccagtagctgatcaacaattagct
gacttggggatcgaagttgaggaaaagtaccaagacagtgtaaaggcaactgaagagcgt
cttgaaaagatggctgctgaagatgctgcagaaaattcaacttgggataagtaa
DBGET
integrated database retrieval system
