Lactobacillus crispatus: LCRIS_01296
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Entry
LCRIS_01296 CDS
T01222
Symbol
dpo
Name
(GenBank) Uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCRIS_01296 (dpo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_01296 (dpo)
Enzymes [BR:
lcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LCRIS_01296 (dpo)
DNA repair and recombination proteins [BR:
lcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCRIS_01296 (dpo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CBL50743
UniProt:
D5GY84
LinkDB
All DBs
Position
complement(1302190..1302849)
Genome browser
AA seq
219 aa
AA seq
DB search
MDYPKKLIDEVKERSKGMQLEGINSGSGPQHPLLMIVGEAPGRNEIVNNIPFSGDAGKEL
DKSLEQIGLTRDQVYITSAVRSRPFAIKKVFSKRENKEVIKYPNRKPTKKEILAHAPFLD
FEIDYAQPKLIVALGNTGLERLLGSGHKISAEHGQVIKNTPILRLNETKDGYIWSKERYT
IFPEYHPAAVFYNRKLTDDIIKDWDKIKPYVEKEKSENE
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggattatccgaaaaaactgattgacgaagtgaaagaacgatctaaaggcatgcagcta
gaaggaattaattctggctcgggtccccaacatcctttattaatgattgtcggtgaggct
cctggtcgaaatgaaattgttaataatattccctttagcggggatgcgggtaaggaattg
gataaatcattggagcagattggtctgacacgtgatcaggtatatattacatctgctgtg
agaagtcgaccttttgcaatcaaaaaggtttttagcaagcgtgaaaataaagaagtaatc
aaatatcccaatcgtaagccaaccaaaaaagagattctagctcatgcgcctttcttagat
tttgaaattgactatgctcaaccaaaactaattgttgccttgggtaatacaggattagaa
cgtcttttggggtctggtcataagatttcagctgaacatggtcaagtaattaaaaataca
ccaattttacgtttaaatgaaactaaagacggctatatttggtcaaaagaaagatacact
attttcccagaatatcatcctgccgctgttttttataatcgcaagctaacagatgatatt
attaaagattgggataaaatcaagccgtatgtagaaaaggaaaaatctgaaaatgagtaa
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