Lacticaseibacillus casei 12A: LCA12A_1247
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Entry
LCA12A_1247 CDS
T03665
Name
(GenBank) FtsJ-like RNA binding methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
lcx
Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcx03009
]
LCA12A_1247
Enzymes [BR:
lcx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LCA12A_1247
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LCA12A_1247
Ribosome biogenesis [BR:
lcx03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LCA12A_1247
23S rRNA modification factors
LCA12A_1247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_23
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
EKP99572
LinkDB
All DBs
Position
complement(1644350..1645180)
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AA seq
276 aa
AA seq
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MTKIKKERVDVLLVEQGLFESREQAKRSVMAGEVYDQNNQRLDKPGVKIAGDAILHVKGK
KMPYVSRGGLKLAKALKVFNIDLKDKTVLDIGASTGGFTDVALQNGAKMSYALDVGYNQL
AWKLREDPRVKVMERVNFRYSKPEDFTDGPVEFAMTDVSFISLKLILPPLKAILIPGGHA
VALIKPQFEAGPANVGKHGIVRDPQVHRDVLKMIVDFALEAGYDVLGLDYSPIKGGEGNI
EFLIHLQNSAQTPGKMAPDVDIEETLTAAYGDLHRP
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatcaaaaaagaacgcgttgatgttttgctagttgaacaaggtttatttgaa
tctcgtgagcaagcaaagcgatcagtgatggctggcgaagtctatgatcagaacaatcag
cgactcgacaaaccaggcgtaaaaattgctggcgatgctattttgcatgtgaaaggcaaa
aaaatgccttatgtcagtcgcggtgggttgaagttagcgaaagccttgaaagtcttcaat
attgacttgaaggacaaaaccgttttggatatcggggcctcgaccggcggcttcacagac
gttgccttacaaaacggcgccaagatgagttatgcattagacgttggctataatcaattg
gcgtggaaactgcgtgaagatcctcgggtcaaagtaatggagcgggttaactttcggtat
agtaagccggaagacttcactgatggtccagttgagtttgccatgacggatgtcagcttt
atttcattaaagcttattttgccgccgttaaaagcaattctgattcccggtggtcatgcg
gttgccctcattaagccacaatttgaggcggggcctgctaatgttggcaaacacgggatt
gttcgcgatccgcaggtccaccgagacgtgctgaaaatgatcgttgatttcgcacttgag
gctggatacgatgtcttgggattggattacagtccgatcaaaggcggcgaaggtaatatt
gaatttttaattcatctgcaaaatagtgcgcaaacgcctgggaaaatggcgcctgatgtc
gatattgaagaaactttgactgccgcttatggtgatttacatcggccataa
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