Lelliottia jeotgali: LJPFL01_0777
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Entry
LJPFL01_0777 CDS
T05035
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
lef
Lelliottia jeotgali
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LJPFL01_0777
Enzymes [BR:
lef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LJPFL01_0777
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Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
DUF2732
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
ASV54140
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Position
833905..836379
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AA seq
824 aa
AA seq
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MLQCPPPNVNPLELFVSLLPVAAVLPELLAALRHAPQILLNAPTGAGKSTWLPLQILKEG
NIPGKIILLEPRRLAARNVAQRLAELLGEKPGETVGYRMRAETCVSAATRLEVVTEGILT
RMLQNDPELSGVGLVILDEFHERSLQADLALALLLDVQLGLRDDLKLLIMSATLDNLRLQ
QILPDAPVISSEGRAFPVDRRYQSLPAHQRFDEAVAIAAAELLRQEPGSLLLFLPGVGEI
QRVQEKLASRVGSDVMLCPLYGALSLNEQRKAILPAPAGQRKVVLATNIAETSLTIEGIR
LVVDTAQERVASFDPRTGLTRLLTQRISQASMIQRAGRAGRLEPGICLHLIGAEQAERAT
VQGSPEILQSDLSGLLLELLQWGCLDPSQLTWLDQPPAVNLAAARRLLTQLGALENERLS
SRGQKMATLGNEPRLAAMLVAAKNDDEVATAAKLTAILEEPPRGGSSDLASAFSRNQPNW
QQRAQRLSQRLNSRGGALDSDLIAGLLAQAFPDRIARRRGLDGRYQLANGMGAMLDSDDA
LTRHEWLIAPLLLQGSSSPDARILQAIAVDIEALTRTCPQLLQQSDTIEWDDAQGTLKAF
RRNQIGRLTVSVKPLAKPSEEELHQAMLNGIRDKGLNVLNWTPEAEQYRLRLHCAARWLP
QYAWPAVDDASLLASLESWLLPQMSGVHSLRALKSLDVKRALENLLDWSLRQRLDSELPG
HYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATTPSIAEGRVSLVLELLSPAHRPLQIT
RDLGAFWAGSYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgctacaatgtccgccgcctaatgttaaccctctggagctgttcgtgtccttattgccg
gtcgccgccgtactgcctgagctacttgccgccttacgacatgcccctcagatcctgctg
aatgcgccaacgggcgcgggtaaatcgacctggttgccgctgcaaatcctcaaagagggg
aatattcccggaaaaattattctgctggagccgcgcaggctggcggcccgcaacgtggcg
caacggctcgctgaactgctgggcgaaaagccgggcgaaacagtcgggtatcgtatgcgc
gccgaaacctgcgtcagcgccgcgacacgcctcgaagtggtcacagagggcattcttacc
cggatgctgcaaaacgatccggagctgagcggcgtagggctggtgatcctcgatgaattt
cacgagcgcagcctgcaggccgacctggctctcgctttgctgctcgacgtacagcttggg
ctgcgcgacgatctcaaattgctgatcatgtccgcgacgctcgataatctgcgtctgcag
cagatcctgcccgatgcccccgtgatttcatcagaagggcgggcgtttcccgtcgatcgt
cgctatcaatcgttacccgctcatcagcgttttgatgaagccgttgctattgctgccgca
gagttattgcgtcaggagcccggctcgctgctgctgtttttacccggcgtcggtgaaatt
cagcgcgtccaggaaaagctcgcttcccgcgtcggcagcgatgtcatgctctgcccgcta
tacggcgcactttcgctgaacgaacagcgcaaagcgatccttcctgcacccgccgggcag
cgcaaagtggtgttggcgactaatattgccgagaccagtttaaccattgaaggtattcgt
ctggtggtcgataccgcgcaggagcgggtagcgagtttcgatccgcgcactggcctgacg
cgccttctgacacagcgcatcagccaggcgtcgatgattcagcgtgcgggccgcgccggg
cgactggagccggggatttgcctgcatctcatcggcgcggaacaggcagaacgcgcgaca
gtgcagggctcgccggaaatcctgcaaagcgatctttctgggctactgttggaattactg
caatggggttgcctggacccgagccaactgacctggctcgaccagcccccagcagtgaat
ctggcggcggcacgtcgattgctcacgcagctcggcgcactggagaatgaacgcctgtcg
tcccgcgggcagaaaatggcgacgcttggcaacgaaccgcgtctggcggcgatgctggtg
gcggcaaaaaatgatgacgaagtggcaaccgccgcgaaacttacggcgattctggaagag
cctccgcgtggcggaagcagcgatctggcctcggcattttcgcgcaatcagcctaactgg
cagcagcgcgcgcagcggcttagccagcgcctgaacagtcgcggtggtgcgctggacagc
gatcttatcgccggtctgctggcgcaggctttccccgaccggattgcgcgccgtcgcggg
ctggacggtcgttatcagctggcgaacggcatgggcgccatgctcgacagcgacgacgcg
ctgacccgccacgagtggctgatcgccccgctgctgttgcaggggagttcatccccggat
gcgcgtattttgcaggctatcgccgtggacattgaggctctgactcgcacctgcccgcag
ctgttgcagcaatcggacactatcgagtgggacgatgcgcagggcacgctgaaagcgttt
cgccgcaaccagattggcaggttgactgtcagcgtaaaaccgctggcaaaaccctccgaa
gaggaactgcatcaggcgatgctcaatggcattcgcgataaagggctgaacgtgctcaac
tggacgccggaggccgaacaatatcgcctgcggttgcactgtgccgcgcgctggttgccg
caatacgcgtggccggcggttgatgacgcgtcactgttggcctcgctggaatcgtggtta
ttgccgcaaatgagcggcgtgcattctctgagagccctgaaatcgctggatgtgaagcgg
gcgcttgagaatttactcgactggtcattacgtcaacgtctggatagtgagttgcctggg
cattacactgtgccgaccggaagccggattgccattcgatatcatgaggataatcccccg
gctctggcggtgcggatgcaggagatgtttggcgaagcgactacgccgtcgattgccgaa
gggcgcgtttcgctggtgctggagctgttgtcgcccgcccatcgtccgctgcaaatcacc
cgcgacctgggcgcgttctgggccggaagttatcgcgaagtgcagaaagagatgaaaggg
cgctacccgaaacacgtctggccggacgatccggcgaataccgcgccgacgcggcgcacg
aagaagtattcatag
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