Lodderomyces elongisporus: PVL30_001395
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Entry
PVL30_001395 CDS
T01116
Symbol
RPB7
Name
(RefSeq) DNA-directed RNA polymerase II subunit
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
lel
Lodderomyces elongisporus
Pathway
lel03020
RNA polymerase
lel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PVL30_001395 (RPB7)
09124 Replication and repair
03420 Nucleotide excision repair
PVL30_001395 (RPB7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_001395 (RPB7)
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_001395 (RPB7)
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_001395 (RPB7)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
PVL30_001395 (RPB7)
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PVL30_001395 (RPB7)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PVL30_001395 (RPB7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
5234589
NCBI-ProteinID:
XP_001526600
UniProt:
A5DVP2
LinkDB
All DBs
Position
2:complement(278029..278550)
Genome browser
AA seq
173 aa
AA seq
DB search
MFFLKDLSLNLTLHPSYFGPQMDQYLRDKLLSDVEGTCTGQFGYIVCVLDSMNIDVGKGR
IIPSSGMAEFEVKYRAVVWKPFKGEVVDGVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK
FNPSANPPAYSSPDENIEKGSKVRLKIVGTRTDVNEIYAIGSIKEDYLGPSPM
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgttttttctcaaagatctatcgttgaatcttacacttcacccatcatattttggtcct
cagatggaccagtatctaagggataagttattaagtgacgtggagggaacatgtacaggt
cagtttggctatattgtgtgtgtgcttgattcaatgaatatagatgtggggaaaggccga
atcatacccagttcaggaatggcagagtttgaagtgaagtaccgtgccgtggtgtggaaa
cctttcaaaggtgaagttgtggatggggtggtaacaacagtgaataaaatgggatttttt
gccgatgttggtccattatcagtgtttgtgagcacgcatctaataccctcggatatgaaa
ttcaacccatcggcgaatccccctgcatactcaagtccagatgaaaatattgagaaaggc
tcaaaagtaaggttgaaaattgtaggaacgagaactgatgtgaatgaaatatatgcaatt
ggaagtatcaaggaagattacctcggacctagtccaatgtaa
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