Lodderomyces elongisporus: PVL30_001397
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Entry
PVL30_001397 CDS
T01116
Symbol
RPB2
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03020
RNA polymerase
lel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PVL30_001397 (RPB2)
09124 Replication and repair
03420 Nucleotide excision repair
PVL30_001397 (RPB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_001397 (RPB2)
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_001397 (RPB2)
Enzymes [BR:
lel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PVL30_001397 (RPB2)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PVL30_001397 (RPB2)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PVL30_001397 (RPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
MRNIP
Motif
Other DBs
NCBI-GeneID:
5234247
NCBI-ProteinID:
XP_001526602
UniProt:
A5DVP4
LinkDB
All DBs
Position
2:complement(280078..283794)
Genome browser
AA seq
1238 aa
AA seq
DB search
MSHDQEMDDPYMYDADVEAQNITPEDCWTVISSFFQEKGLVSQQLDSFDEFIESTIQELV
WEDSHLILDQPAQHTSEKDHDNKRYEINFGKIYISKPTQTEGDGTTHPMFPQEARLRNLT
YSSPIYVDMTKRVFTSDDNKRIDNELEWHEIDVEGEKKTSKVYLGKVPIMLRSKFCMLRD
LGEHEFYELKECPYDMGGYFVINGSEKVLIAQERSAANIVQVFKKAAPSPISHVAEIRSA
IEKGSRLISSMQIKLYGRDEKGTSARTIKATLPYIKEDIPIVIVFRALGIVPDGDILEHI
CYDQNDWQMLEMLKPCVEEGFVIQEREVALDFIGRRGVLGIRREKRIQYAKDILQKELLP
NITQEEGFETRKAFYLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFK
KLTKDIYNYMQRCVENDKEFNLTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQV
LNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLM
SCISVGTPSDPILSFLRDWGLEPLEDYTPANSPDVTRVFVNGVWVGVHREPASLVDYMRD
LRRNGDISPEVSLIRDIREKEFKIFTDAGRVYRPLFIVDDKPDSATKGDLKLQKEHVNQL
LESSYEGYDEDDEDAAPKYTWSSLVKEGIVEYVDAEEEETIMIAMTPDDLEASKSSLTET
QQQNLQMEEQELDPAKRIKPTNSSNTHTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTY
QSAMGKQAMGVFLTNYSVRMDTMANILYYPQKPLATTRAMEHLKFRELPAGQNAIVAIAC
YSGYNQEDSMIMNQSSIDRGLFRSLFFRSYMDLEKRQGMKALETFEKPSRSDTLRLKHGT
YEKLDDDGLIAPGVRVSGEDIIIGKTTPIPPDTEELGQRTQYHTKRDASTPLRSTESGIV
DQVLLTTNGDGAKFVKVRMRTTKIPQIGDKFASRHGQKGTIGVTYRHEDMPFTSEGVVPD
LIINPHAIPSRMTVAHLIECLLSKVSALSGLEGDASPFTDVTAEAVSKLLREHGYQSRGF
EVMYNGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLR
FGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGVCGLMSVIANLKKNQFECRSCKNKT
NIYQIHIPYAAKLLFQELMAMNITPRLYTESSGVSIRA
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgatcaagagatggatgatccgtatatgtatgatgcggatgtcgaggcgcag
aacattaccccggaggattgttggacagttatttcgtcgtttttccaggaaaagggttta
gtttcacagcaactcgactcgtttgatgaattcattgaatcaacaattcaagaattagta
tgggaagattcccacttgattttggaccagccagcacagcatacatcggaaaaggaccat
gataacaagagatatgagatcaattttggaaaaatttacatctccaagccaactcagact
gaaggtgatggtactacgcaccctatgtttccgcaagaagcaagacttcgtaatcttaca
tactcttcgcccatatatgttgatatgacaaagcgagtgtttacatctgatgataacaag
cgaatagataacgagttggagtggcatgaaatcgacgttgaaggagagaaaaagacttca
aaggtttatctcggtaaagttcctataatgttgagatcaaaattctgtatgttgagagac
ttgggagaacatgaattttatgagttaaaggaatgtccttatgatatgggtggatatttc
gtcattaatgggtcagagaaagtccttattgcccaggaaagaagtgcagcaaatatcgtg
caagtgtttaaaaaagcagcaccatcaccaatctcacatgtagcagaaattagatcggca
atcgaaaaggggtcacgtttgatctcgtcaatgcaaatcaagttatatggtcgtgatgag
aagggaacctctgcaagaactatcaaggctactttgccatatatcaaggaagacatcccc
attgttattgtatttagagcattgggtatcgtgccagatggtgatatcttggagcacatt
tgttatgatcagaatgattggcaaatgttggagatgttgaaaccatgtgtcgaagaaggt
tttgttattcaagagcgtgaagttgcacttgatttcattggtagaagaggtgttcttggt
attcgtagagaaaaacgtattcaatatgctaaggatattttgcaaaaggagttgcttcca
aacatcacacaagaggaaggttttgaaacacgaaaggcgttttaccttggttacatggtg
aatagattattactttgtgcgttggaaagaaaggaaccagacgacagagatcatttcggt
aaaaaaaggctagatttagcgggacctttattagccaacttgttccgaatcttgtttaaa
aaattaacaaaagatatttacaactacatgcagagatgtgttgaaaatgataaggagttt
aacttgacattggctgttaagtcccaaacaattactgatgggttaagatactcccttgcc
accggtaactggggtgagcaaaagaaagccatgagttccagagctggtgtctcacaagtg
ttgaatagatacacttactcgtctacattgtcgcatttgagaagaaccaatacaccaatc
ggaagagacggtaagattgccaaaccaagacagttgcataatactcattggggtttggtt
tgtcctgccgagactccagaaggtcaagcgtgtggtttggtgaagaacttgtcgcttatg
tcgtgtatctctgtgggtacgccctcagatcctatcttgtcgtttcttcgtgattggggt
ttagagcctttagaggattatactcctgccaactcaccagatgtcactagagtttttgtt
aatggtgtttgggtaggtgtccacagggagccagcttctttggttgattatatgcgtgat
cttagacgaaatggtgacatttctcctgaagtgtcactcatcagagatattagggagaag
gaattcaaaatctttactgatgcaggtagagtttatcgtccattattcattgttgacgat
aaacctgattctgctaccaaaggtgatttgaaacttcaaaaagaacatgttaatcagctt
ttggagtcttcatacgaaggatatgatgaagatgatgaggatgcggcaccaaaatataca
tggtcttcattggttaaggaaggtattgttgaatatgtcgatgctgaagaagaagaaacg
attatgattgccatgacgcccgatgatcttgaagcttcaaagagcagtttgaccgagact
caacaacaaaacttgcaaatggaagagcaagagcttgatccagcaaagagaatcaaaccc
acaaacagtagtaacacgcatacgtttactcattgtgagattcacccttcaatgattctt
ggtgttgcagcctcgattattccgttccctgatcataatcaatcgccacgtaacacatat
caatctgcgatgggtaagcaagccatgggtgtctttttgacaaactattcagtgagaatg
gacacaatggctaatattctttactatcctcaaaaacctcttgccaccactagggctatg
gaacatttgaagtttagagaacttcctgcaggacaaaatgccattgttgccattgcatgt
tactctggttacaaccaagaagattctatgattatgaaccaatcttcaattgatagaggt
ttgtttagatctttgttctttagatcatacatggaccttgagaaacgacaaggaatgaag
gcattggaaacatttgagaagccttcgaggtcagatactttacgtttgaaacatggaact
tatgagaaattagatgacgatggattaattgcacctggtgtgagagtcagtggagaggat
attattattggtaagacgacgcctattccacctgacaccgaggaattgggtcaaaggacg
caataccatacaaagagagacgcatcaacaccattgagaagtactgagtccggtattgtt
gatcaagtgttgttgacaacaaatggtgatggtgccaagtttgtgaaggtgagaatgaga
acaaccaagattccacaaattggtgacaagtttgcttctcgacacggtcaaaagggtacc
attggtgttacatatagacatgaggatatgccgttcacgagtgaaggtgttgtacctgat
ttgattattaatcctcacgcaattccatctcgtatgacggttgcgcatttgattgagtgt
cttttgtctaaagtgtcggcattgtcaggtcttgaaggtgatgcgtcgccattcacagat
gtcactgctgaagctgtttccaagttgcttagagaacatggttaccaatcaagaggattt
gaagttatgtacaatggtcatacaggtaaaaagcttatggcgcaagtcttttttggtcca
acatattatcaaagattgagacatatggtcgacgacaagatccatgccagagctagaggt
cccgtgcaagtgttgactaggcaaccagttgaaggtagatcaagagatggtggtttacgt
ttcggagagatggagagagattgtatgattgcgcacggtgcagccgggttccttaaagaa
aggttgatggaagcctcagatgcattccgtgtgcatgtttgtggagtatgtggtttaatg
tctgttattgcaaatttgaagaagaatcaattcgagtgtcgttcgtgtaagaacaagaca
aatatttaccagatccacattccatacgcagccaaattattattccaagagttgatggcg
atgaacattaccccgagattgtacacagagagttcgggagtgagtatcagggcataa
DBGET
integrated database retrieval system
