Lysobacter enzymogenes M497-1: LEN_1182
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Entry
LEN_1182 CDS
T04598
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lem
Lysobacter enzymogenes M497-1
Pathway
lem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LEN_1182 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lem03019
]
LEN_1182 (recQ)
03400 DNA repair and recombination proteins [BR:
lem03400
]
LEN_1182 (recQ)
Enzymes [BR:
lem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LEN_1182 (recQ)
Messenger RNA biogenesis [BR:
lem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LEN_1182 (recQ)
DNA repair and recombination proteins [BR:
lem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LEN_1182 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
HHH_5
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
BAV96669
UniProt:
A0A1J1E6K3
LinkDB
All DBs
Position
complement(1346006..1347832)
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AA seq
608 aa
AA seq
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MSSPALEILHRVFGHTAFRGEQAQIVQHVIDGGDALVLMPTGGGKSLCYQIPSLVREGCG
LVVSPLIALMQDQVEALRQLGVRAEYLNSTLSADEAARIERELLAGELDLLYVAPERLLT
ARCLNLIDRAKIALFAIDEAHCVSQWGHDFRPEYRELTILHERWPHIPRIALTATADAPT
QREIAERLNLEDARRFVSSFDRPNLRYRVVHKDNGNRQLLDFLSAHRGDSGIVYAFSRRR
VETVAAQLVEAGIHALPYHAGMPAESRAANQRRFLQEDGVVMVATIAFGMGIDKPDVRFV
AHVDLPKSIEGYYQETGRAGRDGEPADAWLCYGLGDVVSLRQLIQQGEAGEERKRVELRK
LDSLLGYCESTECRRKGLLGWFGEPHPGDCGNCDNCLEPPQSWDGTTAARKALSCVYRTG
QRFGAGHVIDVLRGQTTEKVSRFGHEDLSTFGIGADLDARQWSSVFRQLVAGGLLEADIE
RHGALRLTADSGPVLRGERSLRFRSETAKPARGAGAKKSRGGGAGAAAAVADLAPDALAR
FNALREWRSTTAREQNVPAYVIFHDATLRAIAEQAPDDLDDLAQIPGIGAGKLDRYGEAV
LQHLLDHE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcccccgcactcgaaatcctccaccgcgtcttcggccacaccgcgttccgcggc
gaacaggcgcagatcgtccagcacgtgatcgacggcggcgacgccctggtgctgatgccg
accggcggcggcaaatcgctgtgctaccagattccctcgctggtgcgcgaaggctgcggc
ctggtggtctcgccgctgatcgcgctgatgcaggaccaggtcgaggcgctgcgccagctc
ggcgtgcgcgcggagtacctcaactccaccctgtcggccgacgaggccgcgcggatcgag
cgcgagttgctcgccggcgagcttgacctgctgtatgtggcgcccgagcgcctgctcacc
gcgcgctgcctgaacctgatcgaccgcgccaagatcgccctgttcgccatcgacgaggcc
cactgcgtctcgcaatggggccacgacttccgccccgaataccgcgaactgacgatcctg
cacgagcgctggccgcacatcccgcgcatcgccctgaccgccaccgccgacgcgccgacc
cagcgcgagatcgccgaacggctcaacctggaagacgcgcgccgcttcgtcagctcgttc
gaccgccccaacctgcgctaccgcgtggtccacaaggacaacggcaaccgccaactgctc
gatttcctgtccgcgcaccgcggcgacagcggcatcgtctacgcgttctcgcgccggcgc
gtggaaaccgtggccgcgcaactcgtcgaggccggcatccacgccctgccctaccacgcc
ggcatgccggccgaatcgcgcgcggccaaccagcgccgcttcctgcaggaagacggcgtg
gtcatggtcgccaccatcgccttcggcatgggcatcgacaaacccgatgtgcgcttcgtc
gcccacgtcgacctgcccaagtcgatcgaaggctattaccaggaaaccggccgcgccggt
cgcgacggcgaaccggccgacgcctggctgtgctacggcctgggcgacgtggtgagcctg
cgccagctgatccagcaaggcgaagccggcgaggagcgcaagcgggtggagctgcgcaag
ctcgactcgctgctgggctattgcgaatccaccgaatgccggcgcaaaggcctgctcggc
tggttcggcgaaccgcacccgggcgactgcggcaactgcgacaactgcctggagccgccg
cagagctgggacggcaccaccgccgcgcgcaaggcgctgtcgtgcgtctaccgcaccggc
cagcgtttcggcgcgggccacgtcatcgacgtgctgcgtgggcagaccaccgagaaggtc
tcgcgcttcggccacgaggacctgagcaccttcggcatcggcgccgacctcgacgcgcgc
caatggagcagcgtattccgccagctcgtcgccggcggcctgctggaggccgacatcgaa
cgccacggcgcgttgcgcctgaccgccgactccggcccggtgctgcgcggcgagcgcagc
ctgcgcttccgcagcgagaccgccaagcccgcgcgcggcgcaggcgccaagaaatcgcgc
ggcggcggcgccggcgcggcggccgcggtcgccgatctcgctcccgacgcgctggcccgc
ttcaacgccctgcgcgaatggcgctcgaccaccgcgcgcgaacagaacgtccccgcctac
gtgatcttccacgacgccaccctgcgcgccatcgccgaacaggcgccggacgacctcgac
gatctggcccagattcccggcatcggcgcgggtaagctcgatcgctacggcgaggcggtg
ttgcagcatctgctcgatcacgagtag
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