Lysobacter enzymogenes M497-1: LEN_4568
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Entry
LEN_4568 CDS
T04598
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lem
Lysobacter enzymogenes M497-1
Pathway
lem03030
DNA replication
lem03410
Base excision repair
lem03420
Nucleotide excision repair
lem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LEN_4568 (polA)
03410 Base excision repair
LEN_4568 (polA)
03420 Nucleotide excision repair
LEN_4568 (polA)
03440 Homologous recombination
LEN_4568 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lem03032
]
LEN_4568 (polA)
03400 DNA repair and recombination proteins [BR:
lem03400
]
LEN_4568 (polA)
Enzymes [BR:
lem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LEN_4568 (polA)
DNA replication proteins [BR:
lem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LEN_4568 (polA)
DNA repair and recombination proteins [BR:
lem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LEN_4568 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LEN_4568 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
BAW00056
UniProt:
A0A1J1ECS5
LinkDB
All DBs
Position
complement(5688590..5691355)
Genome browser
AA seq
921 aa
AA seq
DB search
MKRLVLIDGSSYLYRAFHALPPLSNDAGEPTGALFGVVNMLRATLNERPDYVAFVVDAPG
KTFRDDLDPNYKANRPPMPDDLRAQVLPMCEIVEALGIPILRIDGVEADDVIGTLALRAN
QDGIDVTISTGDKDFAQLVRPGVVLVNTMSGSRMDSDAAVIDKFGVRPDQIIDLLSLMGD
SVDNIPGVEKCGPKTAAKWLGEYGSLDGVIEHAGQIKGKIGDNLRAALPRLPLNRQLATI
KTDVELERGPDQLALRERDADVLRGLYARYGFKQALRELEGASTANDLASDRAGLRATAA
GHARSGGAGETPDAALAVKGEYEAVTEQAQLDALVASLQAVEEFAFDSETDSLDPMQANL
VGLSFASETGRAVYIPLGHDYPGAPAQLDREAVLAALRPVFADPARRKLGQHGKYDLHVL
RRHGVEVAGYADDTMLESFVYNATASRHDMDSLAKRYLGYDTIKYSDVAGKGAKQILFSQ
VAIDDATKYAAEDADVTLRLHRVLGARLAAEPALEKVYREIEMPLVPVLARVEANGVMID
GDELRRQSQNLGKRMLEAQMKATELAGRTFNLDSPKQLQALLFDELKLPVLVKTPTGQPS
TNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPHTGRVHTSYHQAGAATGR
LASSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLVACDYSQIELRIMAHLSQDEGLVRAFE
SGADVHRATAAEVFGKKSLDEVSANERRAAKAINFGLMYGMSAFGLARQLGIGRGEAQDY
IALYFSRYPGVRDFMERTRQDARENGYVETVFGRRLYLENIKASNQGLRAGAERAAINAP
MQGTAADIIKRAMIDIDGWLADHRERALMILQVHDELVFEADESFVPELLEQASRRMSAA
ATLRVPLVVDSGIGINWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgactcgtcctcatcgatggttccagctacctctaccgcgccttccatgcgctg
ccgccgctgagcaacgacgccggcgagcccaccggcgcgctgttcggcgtggtcaacatg
ctgcgcgcgaccttgaacgaacggccggactatgtggccttcgtggtcgacgcgcccggc
aagaccttccgcgacgatctcgacccgaactacaaggccaaccgcccgccgatgcccgac
gacctgcgcgcgcaggtgctgccgatgtgcgagatcgtcgaggcgctggggatcccgatc
ctgcgcatcgacggggtcgaggccgacgacgtgatcggcaccctggccctgcgcgcgaac
caggacgggatcgacgtcaccatctccaccggcgacaaggacttcgcccagctggtgcgc
ccgggcgtggtcctggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
atcgacaagttcggcgtgcgtccggaccagatcatcgatctgctgtcgctgatgggcgac
agcgtcgacaacatccccggcgtggagaagtgcgggcccaagaccgcggccaagtggctg
ggcgagtacggcagcctcgacggggtgatcgaacacgccggccagatcaagggcaagatc
ggcgacaacctgcgcgcggcgctgccgcggctgccgctgaaccgccagctggcgacgatc
aagaccgacgtcgaactcgaacgcggcccggaccagctggccctgcgcgagcgcgacgcc
gacgtgctgcgcggcctgtacgcgcgttacggcttcaagcaggcgctgcgcgagctggaa
ggcgcgagcaccgccaacgacctggccagcgatcgcgccggcctgcgcgccaccgccgcc
ggccacgcccgcagcggcggggcgggcgagacgccagatgcggccctggcggtcaaaggc
gagtacgaggcagtgaccgaacaggcgcagctcgacgcgctggtcgcctcgttgcaggcg
gtcgaggagttcgccttcgacagcgaaaccgattcgctcgacccgatgcaggccaatctg
gtcggcctgagcttcgccagcgaaaccggccgcgcggtgtacatcccgctcggccacgat
tatcccggcgcgccggcccagctcgaccgcgaggcggtgctagcggcgctgcgcccggtg
ttcgccgacccggcccggcgcaagctcggccagcacggcaagtacgacctgcacgtgctg
cgccgccacggcgtcgaggtggctggctacgccgacgacaccatgctcgagagcttcgtc
tacaacgccaccgccagccgtcacgacatggattcgctggccaagcgttatctgggctac
gacacgatcaaatacagcgacgtggccggcaagggcgccaagcagattctgttctcgcag
gtcgccatcgacgatgcgaccaagtacgccgccgaggacgccgacgtgaccctgcgcctg
caccgcgtgctcggcgcgcggctggcggccgagccggcgctggagaaggtctaccgcgag
atcgaaatgccgctggtgccggtgctggcgcgggtcgaggccaacggcgtgatgatcgac
ggcgacgaattgcgccggcaatcgcagaacctgggcaagcgcatgctcgaggcgcagatg
aaggcgaccgagctggccgggcgcaccttcaacctggattcgcccaagcagttgcaggcg
ctgctgttcgacgaactcaagctgccggtgctggtgaagaccccgaccggccagcccagc
accaacgaagaggcgctggaagcgatcgccgaccagcacgaactgccgcgggtgatcctg
gagtaccgcggcctggccaagctgcgcagcacctacaccgacaagctgccggagatggtc
aacccgcataccggccgcgtgcacaccagctatcaccaggccggcgcggcgaccgggcgg
ctggcgtcgagcgacccgaacctgcagaacatcccgatccgcaccgaggacggccgccgc
atccgccgcgccttcgtcgcccccgcgggccgcaagttggtggcctgcgactactcgcag
atcgagctgcgcatcatggcccacctgtcgcaggacgaaggcctggtgcgcgcgttcgaa
tccggcgccgacgtgcaccgcgccaccgctgcggaagtgttcggcaagaaatcgctggac
gaagtcagcgccaacgagcgccgcgccgccaaggcgatcaacttcggcctgatgtacggc
atgagcgcgttcgggcttgcgcgccagctcggcatcggccgcggcgaggcgcaggattac
atcgcgctgtacttcagccgttaccccggcgtgcgcgacttcatggagcgcacccgccag
gacgcgcgcgagaacggctacgtcgagaccgtgttcggccgccgcctgtacctggagaac
atcaaggcctccaaccagggcctgcgcgccggcgccgagcgcgcggcgatcaacgcgccg
atgcagggcaccgcggccgacatcatcaagcgcgcgatgatcgacatcgacggctggctg
gccgaccatcgcgagcgcgcgctgatgatcctgcaggtgcacgacgaactggtgttcgag
gccgacgagagcttcgtgccggagctgctggagcaggcctcacgccggatgtcggcggcg
gccacgctgcgtgtgccgctggtcgtcgacagcggcatcggtattaattgggacgaagcg
cattga
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