Leucoraja erinacea (little skate): 129701097
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Entry
129701097 CDS
T09122
Symbol
cachd1
Name
(RefSeq) VWFA and cache domain-containing protein 1 isoform X1
Organism
leri
Leucoraja erinacea (little skate)
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Gene cluster
GFIT
Motif
Pfam:
dCache_1
VWA_N
VWA_2
VWA
GAPES1
Motif
Other DBs
NCBI-GeneID:
129701097
NCBI-ProteinID:
XP_055498050
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Position
10:complement(43870074..44023154)
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AA seq
1331 aa
AA seq
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MRATVFRQRGESLPQSLRSFLSHPQFCIMARGSSRCVEMGAGHSAWAVAAAAAATRRACS
CSPPTALLAPLLLLLLLLLSLVSPALAAPPESGDFAILEEAQVLANQMRVLATSELGVFN
MQAIYNSFVYIEKISNGETEVQQLAKKIREKFNRYLDVVNRNKQVVEASYTAHLTSPLTA
IQDCCTIPPSMMEFDGNFNTNVSKTISCDRLSTTVNNRAFNPGRDLNTVLADNFKSNPGI
KWQYFSSEEGIFTIFPAHKFRCKGGYEHRSRPVYVSTVRPQSKHIVVVVDHGASATDTQL
QIAKDAAQVILTSIDEHDKISVLAVADAVRTCSLDQCYKTYLSPATSETKRKMTTFLSGI
KSVDGATQHAVGFHKAFQLLQNTNNSTRVHSPTDMVIIYLSSGITSKDSSEEEKKATLSV
ISEQNRHLNNSVMILTYALMNEGITGLKELAFLRDLAEQNSAKYGVPDRSALPVVKGTMM
VLNQLSNLETTVGRFYTNVPNRMIDEAVFSLPYTDEMGDGLIMTVSKPCYFGNMLLGIVG
VDVNLAYILEDVTYYRDSSASYTFLIDNKGYTLMHPSLTRPYLLTEPPLHTDIIHYENIP
RFQLVRQNILSLPLGSQVITVPVNSSLSWHINRLRETRKEAYNVSYAWKLVQDTSFILCI
VMVQPEVPVRHLKNLNTAPSSKLLYHRLDLLGQPTSCLHFKQLATLESPTVMLSAGSFSS
PFEHLSQAETKRMVEHYTAYLSDNTRLIANPGLKSSVRNEVMATSHVTDEWMSQMEIGIL
NSYIVRRYIATPNGVLRIYPGSLMDKAFDPTRRQWYLHALANPALITFTGPYLDVGGAGY
VVTLSHTIHSSRSLSAPGHAVAVMGVDFTLRYFYKVLLDLLPICNQDGGNKIRCFIMEDK
GYLLAHPTLIDPKGHAPVEQQHITHKEPLVANDILNHPNFVKKNLCNSFSDRTVQRFYKF
NTSIVGDLTNLVHGSHCSKYRLTRIPGTNAFLGIVNETCDALAFCACSMVDRLCLNCHRM
EQNECECPCECPLEVNECTGNLTNAESRNPSCEVHQEPLTLAAFDPSLQETLPQCINTRC
NQRTLSGDCFGVLDCEWCMVDSDGKTHLDEPYCASQKECFGGIIGAKSPYIDDMPALGDE
VVALNMIKSAPVGPVAGGIMGCIMVLVLAVYAYRHQIHRRSHQHMSPLAAQEMSVRMSNL
ENDRDERDEDSHEDRGIISNTRFIAAVIERHAHSPERRRRYWGRSGTESDHGYSTMSPQE
DSENPPCNNDPLSAGVDVGNHEEDLELDTPPQTAALLSHKFHHYRLHHHPSLHHSHHLQA
AVTVHTVDAEC
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgacagtttttcggcagcggggggaaagtttgccgcagagtttgagaagtttc
ttgtcgcatccacagttttgcatcatggcgagggggagcagccgttgcgttgagatggga
gctggacactcggcctgggcggtagcagcagcagcagcagcaactcgccgtgcctgttcc
tgcagccccccgaccgccctcctcgcccccttgttgctgctgctgctgctgctgctctcg
cttgtctcgcccgcattggccgcgccgcccgagtccggagacttcgccatcctggaggaa
gcacaagttcttgcgaatcagatgcgagtgctggccaccagcgaacttggagtcttcaac
atgcaggcaatctataactcatttgtttacatagagaagatctctaatggagaaacagaa
gtgcaacagctggctaaaaagataagagagaagtttaatcgctacctcgatgtcgtgaat
cggaacaagcaagtagtggaagcatcctacacagctcacttaacatcaccattgacggct
atccaggactgttgcacgattccaccttcaatgatggagtttgatggaaatttcaacacg
aatgtttcaaaaaccatcagttgtgatagactttccacgactgtcaataaccgagcattt
aaccctggacgtgacttaaacacagtgcttgctgacaacttcaagtcaaatcctggcatt
aagtggcaatatttcagttcagaagaagggattttcaccattttccctgcacataagttt
cgctgcaaaggtggctacgaacatcggagcaggcctgtttatgtttctacggtgaggcca
caatcaaagcacattgtggttgtggtggatcatggggcctcggccacagacacccagctg
cagatagccaaggatgctgcacaagtaattttaacctctatcgatgagcatgacaagatt
tctgtgctggctgtggcagatgcagtccgaacatgctctctggaccagtgctacaaaaca
tacttgtctccggccaccagtgagactaaaagaaaaatgaccacgttccttagcggcata
aagtcggtggatggtgccacacagcatgcagtgggctttcacaaagcatttcagttgctt
cagaatacaaacaacagcacgagggtccattcacccactgacatggtgataatctactta
tcgtctggcatcacctcaaaagattcctccgaagaagaaaagaaggcaacactgagtgtt
atcagtgagcaaaacagacatctcaataactccgtgatgatcctgacttatgctctgatg
aatgagggcataactggattgaaggagcttgcctttcttcgagatttagcagaacagaac
tcagcaaaatacggagttcctgatcgctcagcactcccagttgtaaaaggaacaatgatg
gtattgaatcagttgagtaacttggagactactgtaggaaggttttacacaaacgtgcca
aaccgaatgatagacgaagcagtgttcagtctgccctacacggatgagatgggtgatgga
ttgatcatgactgttagtaaaccctgctactttggaaacatgctgttgggaattgtaggg
gtagatgtgaatttggcttacattctggaggatgtaacttactatcgtgattcttctgcc
tcctatacgttcctaatagataacaaaggctatacacttatgcacccgtccttgactcgg
ccatatctgctcacagagccacctcttcacactgatataattcactatgagaacattcca
agatttcagctcgtcaggcagaacattctcagtctccccttgggcagccaggttattact
gtacctgtaaactcctctttatcttggcacataaatcgattacgagaaaccaggaaggag
gcctataacgtcagctatgcttggaagttggtgcaggacacatcgtttattctctgtatc
gtgatggttcaacctgaggtgccagtaagacacctgaaaaatttgaacactgccccaagt
agtaagcttctataccacaggttggatctgctgggtcagcccacctcctgtttgcatttc
aagcagttggcaacactagaaagtcccacagtcatgctatctgcaggcagcttttcatct
ccatttgagcacctgagtcaagcagagacaaaacgtatggtggagcactacacagcctat
ctgagcgacaacacgcgtctcatcgccaatccaggactcaagtcctctgtcagaaacgaa
gtcatggctaccagtcacgtaacagatgaatggatgtcacaaatggaaatcggcatcctg
aacagttacattgtccgtcgttacatagcaacacccaatggggtgcttcggatttacccc
ggctctctcatggataaagcatttgatcccaccaggagacagtggtacctccatgcattg
gcaaacccagctctgattaccttcactggcccatatctggatgttggaggtgctggttac
gttgttacactcagccacacgattcattcttccaggtccctgtcggcaccgggccatgct
gtggcggtgatgggtgtggactttaccctgcgatacttttacaaggttcttttggattta
ttacccatctgtaatcaagatggaggcaacaaaatcaggtgctttatcatggaggataaa
ggttatctcttggcacatccaactctaattgaccccaaaggccacgcacctgtggaacag
caacatatcacccacaaggaacctctggtggcgaatgacatcttaaaccatcccaatttt
gtgaaaaaaaatctttgcaacagcttcagtgacaggacagtacaacgattctacaaattt
aacaccagcattgtaggtgatctgaccaaccttgttcatgggagccattgttcgaagtac
cgattgaccagaattcctggcaccaatgcctttcttggaattgttaacgaaacatgcgat
gcacttgctttctgcgcctgcagcatggtggacagactttgcctgaactgtcacagaatg
gaacaaaatgaatgcgagtgcccctgtgaatgccccctggaggtgaacgaatgtactggc
aacctgaccaatgcagaaagcaggaatccaagttgtgaagtccaccaggagcctctgact
cttgctgcctttgaccccagtctacaagaaaccctcccacagtgcattaacaccagatgc
aaccaaaggacattgagcggtgattgttttggtgttttggactgcgaatggtgtatggtg
gatagtgatggaaaaacccatctggatgagccatactgtgcatcccagaaagaatgcttt
ggaggaattataggagctaagagtccctacatagatgacatgcctgccttgggagatgag
gttgtggcattgaacatgatcaaaagcgcgccagtcgggccggtggctggtgggatcatg
gggtgtattatggtgctagttctggcagtgtatgcttaccgacaccagatccacaggaga
agccaccagcacatgtctcctctcgcagcccaagagatgtctgtccgaatgtccaacctg
gaaaatgaccgtgatgagagggatgaagatagccatgaggatagaggaatcataagtaac
acaaggtttatagcggctgtaattgaaagacacgcgcacagtccagaacgcaggcgacgg
tactggggacgatcgggaacagagagtgatcacggatacagcaccatgagtcctcaagag
gacagtgaaaacccaccgtgcaataatgacccattatctgcaggagtggatgtggggaat
cacgaagaagatttggagttggacactccacctcagactgctgctttgttaagtcacaaa
ttccaccactatcgcctacaccaccacccttccctccaccacagccaccatctacaggct
gcagttacagtacacacagtggatgcagaatgctga
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