Leucoraja erinacea (little skate): 129701106
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Entry
129701106 CDS
T09122
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04136
Autophagy - other
leri04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129701106 (atg4c)
04136 Autophagy - other
129701106 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129701106 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129701106 (atg4c)
03029 Mitochondrial biogenesis [BR:
leri03029
]
129701106 (atg4c)
Peptidases and inhibitors [BR:
leri01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
129701106 (atg4c)
Membrane trafficking [BR:
leri04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
129701106 (atg4c)
Mitochondrial biogenesis [BR:
leri03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129701106 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
129701106
NCBI-ProteinID:
XP_055498066
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All DBs
Position
10:complement(44950667..45000664)
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AA seq
472 aa
AA seq
DB search
MKDGDPDEVDKLKMKFMSAWHNVKYGWVLRIKTKFSRNSPVFLLGKCYHFKSEGTDETAS
SCMGAATNTKLVSNNAHQFRKDFVSRVWLTYRREFPQLKGSSLTTDCGWGCTLRSGQMLL
AQSLLLHFLGRDWVWTDVPQMVPMESEFFKLNISESDDDNDDTGFTFLPPLENSLQDISQ
QPDLSIDEKLSLNTVDATSEDEKLHRTIVSWLGDSPAATFGIHRLIELGENSGKRAGDWY
GPSVVAHILRRAVEDAVEPELQGITVYVAQDCTVYIADVMEKHLQTHEHGMPNSPERNAV
VILIPVRLGGEKVNPEYKEIVKGVLSLEFCVGIIGGKPKQSFYFVGFQDDSLIYMDPHYC
QSIVDVSLEDFPLESYHCPSPKKMPFGKMDPSCTIGLYASSQYYFEQIIDEVTKVLISPS
KDNYPIFTFSKGHAKDYEVDKHCTMKTESAVQVSGTRRRKAERLSNEEFVLL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatggtgatcctgatgaagtggataaactgaagatgaagtttatgtctgcatgg
cacaatgtgaaatatggctgggttctcagaatcaaaacaaaatttagtagaaattcgcct
gtctttttgctgggaaaatgctatcatttcaagtcagagggaacggacgagactgcatca
agctgcatgggtgcagctacaaacactaaactggtttcaaataatgcgcatcaattccgt
aaggacttcgtcagtagggtttggctcacataccgccgtgaattcccacagttaaaagga
tcctctctcacaacagattgtggctggggctgcacgctaaggtctggtcaaatgttgtta
gcacaaagtcttctgctccattttcttggtcgagattgggtctggacagatgtgccacaa
atggttcccatggaatctgaattcttcaagttgaacatatcagaatctgatgatgataat
gatgatacagggtttacctttctgccacctttggaaaactcacttcaggacataagtcaa
caaccggacttgtctattgatgaaaaactatctttaaatacagtcgatgcaacaagtgag
gatgaaaagctgcatcggaccatagtctcttggttgggggacagtccagcagcaacattt
ggaatacataggctgatagagttgggtgaaaactctggcaagcgagctggggattggtat
ggcccatctgtagtggcacacattttaaggagagcagtggaagatgcagtggagcccgag
ctacaaggaataacagtttatgttgctcaggactgtacggtttatattgctgatgtaatg
gaaaaacatttacaaacccatgaacatggaatgccaaattcaccagaaagaaatgctgtt
gttatcctaataccagtgagacttggaggggagaaggtcaaccctgaatacaaagagatt
gtaaagggggtcttgagtcttgagttctgtgttggaattattggtggaaaaccaaagcaa
tctttctactttgtcggatttcaagatgacagtttaatttacatggatcctcattactgc
caatcaatcgtggatgtcagcttggaggatttcccactcgagtcatatcactgtccatct
ccgaaaaaaatgccatttggcaaaatggatcccagctgcaccataggactttatgcttcc
agccaatattattttgaacaaataattgatgaagtcacaaaggttttgatctctccttcc
aaggataattatccaatatttaccttttcaaaggggcatgctaaagattatgaagttgat
aaacattgcacaatgaaaactgaatcagcagtacaggtctctggaactcggaggaggaaa
gcagagaggttgagtaatgaggaatttgttttgttgtaa
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