Leucoraja erinacea (little skate): 129707779
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Entry
129707779 CDS
T09122
Symbol
hdac10
Name
(RefSeq) polyamine deacetylase HDAC10 isoform X1
KO
K18671
histone deacetylase 10 [EC:
3.5.1.98
]
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129707779 (hdac10)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129707779 (hdac10)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129707779 (hdac10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
129707779
NCBI-ProteinID:
XP_055509049
LinkDB
All DBs
Position
22:20946767..20976429
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AA seq
719 aa
AA seq
DB search
MDGPPCDWTTSLSLKAPFRRCEVWLCRKQRCWRRLAAVGRVAAMASGTGLIYSEQMMSHQ
LLWDFPACSIEIPERLSAPFDKLKQYGLVERCIQLPVREAIEEEIILVHSLEYLKAVKST
ASMNVEELKSFSYKYDDVYFHPNSYHCATLSVGATLQLVDAVMSGRVRNGMALVRPPGHH
SQKNDACGYCIFNNVAIAAKYAKQRHGTKRILIVDWDVHHGQGTQYIFEKDSSVLYFSWH
RYEHQQFWPNLKDSDYDAIGKGNGAGFTINLPWNKVGMGNADYLAAFLSILLPMAYEFNP
ELILVSAGFDSVVGDPEGEMCATPECFAHLTQLLMPLANGKLCVVLEGGYNLRSLSESVC
MTIRALLGDPVPPLVGQMAPCISAVETIQNVTAVHQPYWKCLKYHEGIIIKDPRLKKLNC
CTEEHNFESNITTTEKEITMLSKEKQDFDEFMDSHMKKVLVLTPSVRTAWAGDEVKSAKL
DKCLKVEAKKTFSSAGILLSAGDTAELENKIILPSLGYIFPLIDKIAKREVRNGIVVAPS
LSSSVVAAQYSITVGLSRVLLLVLGDAEIPDDVKADEKILVVNICGKQKEKGRNNYFIPI
CWKEGNECDGDLLHATFELILPVAYEHRPELVIFALGDNTGIQAVTLAHLTHLLQLLAEG
RILVMTQASDLVATLTSSLLGDPLPSIRSFVLNQENAFVLMKLTQELNQHWKLLPKSVH
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggacggtccgccttgtgattggaccacttcgctgtctctcaaggccccattccgccgg
tgtgaggtttggttgtgccggaaacagcggtgttggcgacgtctggctgccgtgggtcgt
gttgcagccatggcttcaggaactggattgatctacagtgaacaaatgatgagccatcaa
ctgctgtgggatttcccagcttgcagcattgaaataccagaacgactttctgctccattt
gacaaactgaaacagtatggtcttgtggaaagatgcatccaattaccagttcgagaagcc
attgaagaggaaattatattggttcacagcttggaatatttgaaagctgtgaaatcaact
gcatctatgaatgttgaagaattgaagagcttctcatacaaatatgatgatgtatatttt
caccctaattcatatcactgtgccacattatctgtgggagcaactcttcaacttgttgac
gcagtcatgtccggcagagtaagaaatgggatggcactggtcagacctccaggacaccac
agccagaagaatgatgcctgtggatattgcatctttaataatgtagcaattgcagccaag
tatgcaaaacaaagacatggaacaaaaaggattctgatagttgattgggatgtgcatcac
ggccaaggaactcagtacatatttgagaaggactcaagtgttctgtacttctcatggcat
cgctatgaacaccagcagttttggcctaatttaaaggactctgactacgatgcaattgga
aaaggcaatggtgcaggattcaccataaatcttccatggaacaaggtgggaatgggaaat
gctgattatttggcagctttcctctccattttacttcctatggcttatgagtttaatcca
gaattaattctggtatcagctggatttgattccgttgttggtgatcctgagggtgaaatg
tgtgctacacctgaatgctttgctcatctaactcagttactgatgccattagccaatgga
aaactgtgtgttgtgttagagggaggatacaacttacgttccctttctgaatctgtctgc
atgactatccgagcattattaggggaccctgtgcctccattggttggccagatggcacca
tgcataagtgctgtggaaacaattcaaaatgtaacagctgttcatcagccatactggaaa
tgtttgaagtatcacgaaggtatcattattaaagacccaagactcaagaaattgaactgc
tgtactgaagagcataattttgaatcgaatatcacaactacagagaaagaaattacaatg
ctttccaaagagaagcaagattttgatgaattcatggattcccacatgaagaaagttctt
gtgttaactccctctgtaagaactgcatgggctggtgatgaagtgaagtcagcaaagttg
gacaaatgccttaaagtagaagcaaagaaaacattctcctcagctggcattctgctcagt
gctggtgatactgctgaactggagaacaaaattattttaccgtcgttggggtatatcttt
ccgctcattgataaaatagccaagagagaggttcgaaatggcattgtggtagccccttca
ttatcatctagtgttgtggcagcacagtatagcattactgttggattaagcagagttttg
cttctggtgcttggagatgctgagattccggatgatgttaaagctgatgaaaaaatccta
gtggtgaacatatgtgggaaacagaaggagaaggggagaaacaattactttatcccaatt
tgctggaaagagggtaatgaatgtgatggggaccttcttcatgcaacatttgagttaatt
ttacctgtggcatacgaacacaggcctgaactggtgatttttgccttgggagataatact
ggcattcaagcagttacactagctcacttgacacatttactccagttgcttgctgaaggt
cgaatccttgtaatgacccaggcctctgatcttgtggcgactttgacaagttccttgcta
ggcgatccgttaccttcaataagatcttttgttttaaatcaagaaaatgcatttgtgttg
atgaaacttacacaagaactgaaccagcattggaaattacttccgaagagtgtgcattaa
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