Leucoraja erinacea (little skate): 129708219
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Entry
129708219 CDS
T09122
Symbol
rreb1a
Name
(RefSeq) LOW QUALITY PROTEIN: ras-responsive element-binding protein 1
KO
K20210
ras-responsive element-binding protein 1
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129708219 (rreb1a)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129708219 (rreb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
zf-Di19
zf-met
zf-C2H2_jaz
zf-H2C2_5
FYDLN_acid
Nitroreductase
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
129708219
NCBI-ProteinID:
XP_055509826
LinkDB
All DBs
Position
2:28457280..28512668
Genome browser
AA seq
1595 aa
AA seq
DB search
MEEVLPEERGAPMLPCQPSGDDLSSVNSMMSAVMGVGSLSGEVTGDKTASDRSPLKVTPS
ARKPKQETKEEMSSFICPLCGKDCGTQHLLTMHIRQHNMDSGGNSHSCSICGKSLSSASS
LDRHMLVHSGERPYTCSVCQQAFTTNGNMHRHMKIHEKEPSVTGAASPPSPSKRRRLSAK
RKLSQEEGEPGKEESPSKKAQVTRESASEAEEERKSEEVLHCPVCLKTFICKYGLESHME
THPDSSLRCGLCCICFKSQRGLLRHNALVHRQLPTDPSGRPFIQNNLTIPGGFHDLAFID
FSCHKFPLISQVWSEVNLRRCTSQVHRFVCETCNKAFPMSDALVLHMHTHRAAATTAGDE
PARWPDSEQASFMAALGLQRAGAARPVMRTDTDLGHVWVDSPHWKLHQDSTAREQPGLNS
APLSTLAPPRGRDAMKVLSLAALPKGFTIQPDSSTKAVRPVSADTIELADIQQILQMASS
APSHISLPPLSKAPSIPTQSMYRQMPPLKPKPPPCTMVVDAMPTSLMSAHLASPGCRPSL
PLPHPPPLRLVKLSADSSLRPQDLKLRPANGSQAFIQPKAEPLSPVEMKAQQAEARMPNE
VNGAVKRERLEGDFKAMGMAVGGKKGTALKKVLYPCRFCDQVFAFSGVLKAHVRSHLGIS
PYQCNICTYIAADKAALIRHLRTHSGERPFICKICHYPFTVKANCERHLRKKHLKLSRKE
IEKHIEYAECRPSALSESFRSPDTVCKYCGQDLKYYRALRHHLRTHSGSKRKPFECRECS
VGFSTKNNCVRHLLRQHTHVEEKEIENHVRSIDCFLGGLRNGADNPSPGLGPAPLSLHAA
HNGYHRGPTIKLEQPAHFSEEPLDFSRKMRPSDRSAPPPYEVGAEPIDLSVPKGKGQARG
QEVRQPAGGNPVLGGAPLLGFPLLPAPGSLLRPLKPKPAPPPLLPKPPVPLKELPPLASI
AQIISSVSTDPPALLMRERGGGAVGQGECGPRPISPPPPPVRGRQETARPDPPPLPLSLT
LPPPLPLPHPLPDPSAGPVPEKAAAPFPLSLHPAARSSLFGALSAAKRRVRRRGIRFKKV
RGALTGAGTGPVPGAEGESGSEFASVERMLVTTDANHFSLYLQSAETKGDLSHLERDKRA
VKLIKAKKNSYSNSVQKITCPYCPRLFPWASSLQRHMLTHTGQKPYPCPTCEAYFSTKSN
CERHLLRKHGVANRSFRRSVLLPRSKLPGTKPLDSTGADPGLDEQEDPASTPSAPPCGPP
GSLGEGVEGGCVGREREEGDEEEEEVQSNKSLDLDLANKMLDFKLEPGPGAQPEPRSTCP
TCGKSFKYAATLARHSKAHAGDRRRELRLAGKRCPRRGAEQEPANPQRGPCAAQRGANAN
GQRGANAQRRGPSDPQRVGPADPQQGPELGGPEEEGGPEEEVGGPEEEEEQRRRAEVPEE
RRKLPAAGPGASKADKRKKVCSVCNKRFWSLQDLTRHMRSHTGERPYKCVTCERTFTLKH
SLVRHQRIHQKENTASRKAAAAAATTPATATAGTTDDEEPWRSDSDGSGEEESEGPSGRT
PSPCSPPALDGVEGPEVEEAGEEKKPLTISTPVTV
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggttctgccggaggagaggggagcgccgatgttgccgtgccagcccagtggg
gatgacctgtcctcggtcaactccatgatgtcggcggtgatgggtgtggggagcctgagt
ggggaggtgacaggtgacaagaccgccagcgacaggagccccctcaaggtcaccccctcc
gctcgcaaacccaaacaggaaaccaaagaggagatgtcttccttcatctgtcccttgtgt
ggaaaggactgtggcacccagcacctgctcaccatgcacatccgacagcacaacatggac
agcggcggcaacagccattcgtgcagcatctgcggcaagtccctgagctcggccagctcg
ctggaccgacacatgctggtccactccggcgagaggccctacacctgctccgtctgccaa
caagccttcaccaccaacggcaacatgcacagacacatgaagatccatgagaaggagccg
tccgtgactggagccgccagcccgccctcccccagtaagaggcgcagactgtcggccaag
aggaagctgagccaggaggaaggagagccggggaaagaggagtcacccagcaaaaaggcc
caggttacgcgagagagtgcctctgaagcggaggaggagaggaagagtgaagaggtccta
cattgtcctgtgtgtctgaagaccttcatctgcaagtatggactggagtcgcatatggag
acccatccggactccagcctgaggtgtggtttgtgttgcatctgcttcaagagccagcga
ggcttgctgcggcacaatgctctggtccacaggcagctccccactgaccccagtggccgc
cccttcatccagaacaacctcaccatccccggcggcttccacgacctcgccttcatcgac
ttctcctgccacaagttccccctcatctctcaggtgtggtcggaggtgaacctacgccgc
tgcaccagccaggtccaccgctttgtgtgcgagacgtgtaacaaggcgttccccatgtcg
gacgcgctggtcctgcacatgcacacgcaccgcgctgccgccaccaccgccggggacgag
cccgcccgatggccggattccgagcaggcctccttcatggcggcgctggggctgcagcgt
gccggcgcggcacggccggtgatgcggacggacacggatctgggccacgtgtgggtggac
agtccccactggaagctccaccaggactccaccgccagggagcagcccggtctcaacagc
gccccgctctccacactcgcccctccccggggcagggacgccatgaaggtcctctcgttg
gcagccctgcccaaaggcttcaccatccaaccagacagcagcacgaaggcggtgaggccc
gtgtcggccgacaccattgagctggccgacatccagcagatcctgcagatggcctcctcc
gccccctcccacatcagcctgccccccctctccaaagccccctccatccccacccagtcc
atgtaccgccaaatgccccccctcaagcccaagcccccgccctgcaccatggtggtagac
gccatgcccacctccctgatgagcgcccacctggcctcgccaggctgccggccctccctc
cccctgccccaccctccccccctgcggctggtcaagctctcggccgactcgtccctgcgg
ccccaggacctcaagctgcgcccggccaacggctcgcaggcctttatccagcccaaggcc
gagccgctgagcccggtcgagatgaaggcccagcaggcggaagcccggatgcccaacgag
gtcaacggggcggtcaagcgggagcggttggagggggacttcaaggccatgggcatggcg
gtgggcggcaagaaggggacggccttgaagaaagtcctgtacccgtgccgcttctgcgac
caggtctttgccttctcgggggtgctgaaggcccacgtgcgctcccacctgggcatctcg
ccctaccagtgcaacatctgcacgtacatcgcggcggacaaggcggccctgatccgccac
ctgcgcacccacagcggcgagcgtcccttcatctgcaagatctgccactaccccttcacc
gtcaaggccaactgcgagcggcacctgcgcaagaagcacctgaagctgagccgcaaggag
atcgagaagcacatcgagtacgccgagtgccggcccagcgccctgtccgagtccttccgc
tcgcccgacacggtgtgcaagtactgcgggcaggacctcaagtactaccgggccctgcgc
caccacctgcgcacccacagcggctccaagcgcaagcccttcgagtgccgcgagtgcagc
gtgggcttctccaccaagaacaactgcgtgcgccacctgctgcggcagcacacccacgtg
gaggagaaggagatcgagaaccatgtgcgctccatcgactgcttcctgggcggcctccgc
aacggggccgacaacccctcccccggcctgggcccagcccccctctctctacacgcagcc
cacaacggctaccaccgcggccccaccatcaagctggagcagccggcccacttctccgag
gagcccctggacttctcccggaagatgcggccgtcggacaggtccgcccccccgccctac
gaggtcggcgccgagcccatcgacctctctgtgcccaagggcaagggtcaggccaggggt
caggaggtcagacagcccgccggggggaatcccgtgctgggcggagccccgttgttgggc
ttcccccttctcccggcccccggctccctcctccggcccctcaagcccaagcccgcccct
ccccccctcctgcccaagccccctgtccccctcaaagagctgcccccactggcctccatc
gcccagatcatctcctccgtctccaccgacccccccgccctgctgatgagggaacgaggg
gggggagcggtggggcagggggagtgcggaccccgacccatctccccccccccgcccccc
gtccgggggaggcaagagacggcccgccccgaccccccccccctccccctctctctcacc
ctcccaccgcctctccctctcccccaccccctccccgacccgtcagctgggccggtcccc
gagaaggcagcggccccctttcccctgtccctccaccccgccgcgcgcagctccctgttc
ggggcgctgagcgcggccaagagaagggtcaggaggaggggcatccgcttcaagaaggtg
cgcggggcgctgacgggggctgggacgggcccggtgcccggagcggagggagagtccggc
tcggagttcgccagcgtggagcggatgctggtcaccaccgacgccaaccacttcagcctc
tacctccagtcggccgagaccaagggcgacctgtcccacctcgagcgggacaagcgggcc
gtgaaactcatcaaggccaagaaaaactcctactccaactcggtccagaagatcacctgc
ccctactgcccacgcctcttcccctgggccagctcgctgcagcgacacatgctcacacac
acaggtcagaagccatacccctgccccacatgtgaggcctacttttccactaagtctaac
tgtgagcgtcacctcttgcgcaaacacggtgtggcgaaccgttctttccggaggagtgtg
ctgctgccccgctccaagctgcccggcaccaagcccctggactccacaggagccgaccct
ggacttgatgaacaggaagatccagcctcgaccccgtccgcccctccctgcggccccccc
gggtctctgggggagggggttgagggggggtgcgtggggcgtgagcgtgaggagggggat
gaggaggaggaggaggtgcagagcaacaagagcctggatctggacctggccaacaagatg
ctggacttcaagctggagccgggccccggggcccagccagagcccaggagcacctgcccc
acgtgcggcaagagcttcaagtacgccgccacgctggcccgccacagcaaggcccacgcc
ggagaccggcggcgcgagctgcggctggccggcaagcggtgcccgcgccgaggagccgag
caggagcccgccaacccccaacgcggcccctgcgccgcccagcgcggggccaacgccaac
ggccagcgcggggccaacgcacagcgacggggcccctccgacccccaacgcgtgggcccc
gccgacccacaacaagggccggagctggggggcccggaggaggaaggggggccggaggag
gaagtgggggggccggaggaggaggaggagcagcggcggcgggccgaggtccctgaggag
aggaggaagctcccggccgcggggcccggcgcatcgaaggccgacaagaggaagaaggtt
tgcagcgtctgcaacaagaggttctggtctctgcaggacttgacacggcacatgcggtca
cacacaggtgagaggccgtacaagtgcgtgacctgcgagcgcaccttcacgctgaagcac
agcctggtccgccaccagcggatccaccagaaggagaacacggcgtcgcgcaaggcagcc
gccgccgccgccaccacccccgccaccgccaccgccggcaccaccgacgacgaggagccg
tggaggagcgacagcgacggctcgggcgaggaggagagcgaggggccgagcggccgcacg
ccctccccctgctcacccccggcgctggacggggtggaggggcccgaggtggaggaagcg
ggagaggagaagaaacctctgactatctcaacgccggttacggtgtaa
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