Leucoraja erinacea (little skate): 129708224
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Entry
129708224 CDS
T09122
Symbol
ssr1
Name
(RefSeq) translocon-associated protein subunit alpha isoform X1
KO
K13249
translocon-associated protein subunit alpha
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129708224 (ssr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129708224 (ssr1)
Membrane trafficking [BR:
leri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
TRAP complex
129708224 (ssr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAP_alpha
Nop14
Motif
Other DBs
NCBI-GeneID:
129708224
NCBI-ProteinID:
XP_055509836
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Position
2:complement(28533381..28555453)
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AA seq
298 aa
AA seq
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MFRPPSLLLLLLLVAGPLTLLLQRGPGSGPLVAADDPTEDEEGIDDSVVEDEDDEAEIEE
DDTTDIMEDEKEEEEEEEDSTFGEPKASPSADTVILFVRGDDFPANNIVKFLVGFTNKGN
EEFVVESLDASFRYPQDYQFYIQNFTALQLNTLVPSQRQATFEYSFIPAEPMGGRPFGLV
INLNYKDANGNIFRDAVFNQTVTITEREDGLDGETIFLYMFLTGLGLLVVVGIHQLLESR
KRRRPSSKVEMGTSTHNNVDMSWIPQETLNQIMQSRRDKTSPRRSPRKRAKRTVGSDE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtccgccgtcgctactgctccttctcctcctcgtcgccggcccgctcaccctg
ctgctgcagcggggaccaggttcagggccgttagttgctgccgacgaccccactgaggat
gaagaaggaattgatgattctgtggtggaggatgaagatgacgaagcagaaatagaggaa
gatgatacgacggacattatggaagacgaaaaagaagaggaagaggaggaagaagattcg
acctttggggaaccaaaggcttctcccagtgccgacacggtcatcctgttcgtgagggga
gatgatttccccgcgaacaacattgtgaaattcttggttggattcacgaacaagggcaat
gaagagtttgtcgtggaatcgttggatgcttcattccgttatcctcaggactaccagttc
tacattcagaatttcaccgcgctgcagctgaacacgctggtgccgtctcaacgtcaggca
acgtttgagtattccttcatccccgccgagcccatgggcggtcggccatttggattggtc
atcaacctcaactacaaggacgccaatggcaatattttccgtgacgcagttttcaaccag
actgttacaataactgaacgtgaggatggcctggatggggaaaccatcttcttgtacatg
ttcctgactggccttggcttgcttgtcgtggtcgggattcaccagctcctagagtcgaga
aaaagaagacggccaagttctaaagtggagatggggacgtctacccacaacaatgtggac
atgagctggattccccaggaaaccctcaatcagatcatgcagagtagacgagacaaaacc
tccccgcggaggtccccccgtaaacgagcgaagagaacggtgggttctgacgagtag
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