Leucoraja erinacea (little skate): 129708328
Help
Entry
129708328 CDS
T09122
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5 isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leri03400
]
129708328 (recql5)
Enzymes [BR:
leri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129708328 (recql5)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
129708328 (recql5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ5
RecQ_Zn_bind
TFIIS_M
ResIII
SRI
DUF1978
Motif
Other DBs
NCBI-GeneID:
129708328
NCBI-ProteinID:
XP_055509977
LinkDB
All DBs
Position
23:complement(18710952..18768833)
Genome browser
AA seq
1006 aa
AA seq
DB search
MCSRGASASGARSRDKDRIRAALSQVFGHESFRSACQESAVRAVVRCDGDVFICMPTGAG
KSLCYQLPAVIAEGVTIVISPLIALIQDQLEHLHILKIQAHSLNSKLSAEERKMVLSDLW
SAKPRIKLLYITPEMAASNTMGPVIDSLLARKLLSYLVVDEAHCVSQWGHDFRPDYLKLG
LLRSKMPSVPCVALTATAPKQVQDDTIASLQLKEPIANFRRPCFRANLFYEVLFTETLTQ
PFVNLKGFCEQALGKKNTSGKFSGCGIIYCRTRNSCQEVAEELTQRGVEAKAYHAGLKNS
ERTEVQQEWMEGKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAAYYQESGRAGRDGKP
SFCRVYYSRTDQNSITFLIKKEIAQMQHKRGCVKNSDKSSMVGFEALVTFCEQPGCRHAA
IAKYFGDEMPVCNRACDHCKNPDTVMKQLDLLQRLDIRKAQALVTKPAAAGPFGYISDLY
AGGRKGYGFERYDNEDGDSGSDEESGHRTKEWNTFYDKQMNLRKNGKPVKDTFVPPDPDC
PLRDAANQKIPKLSVKAREHCLHILEEALIMNKGQEDTKAESADPHSCAIEMEHEAFKAT
KMANLYKALILRKVAEIKKSIQNGLLYPKLTEMDNRTYTTAIADSDKDNEAFISASQLYS
FKSKRVAGGVKILSSPFQTAGDLLKNSVPVESEQKNYTNLDDPIYNLNSTLKKNPQGYTH
PSVDNNGKTNQSSPLLASPNKKKSTKSKLLAESAKKDSQNITKFFQQNKSQGVAMNTTKS
LSDDYSSVVNDAQETDSRKTLSSTVAFSEKLESFPDPIIVTKTRNVDKYLQSNHHVEEKT
SDRLGSLGKAPDVSSQLWHGTHSAGEKRILTDEESGIIDPKRRRTSINPSILYPPDLKGN
KMKKKVTFDPLHQDSTEVLPAASKGGQLKQTADIVVKCLTPYYKEGKFASKDLFKAFARH
LSHLLAVGENASKKNVKEEVQQIIHCFFKSRRKCESENDWRDLHAS
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcccgcggggcctcggcttcaggcgcccggtcccgggacaaggacaggatccgc
gctgccctcagccaggtcttcggccatgagtcgttccggtcggcgtgccaggagagcgcg
gtcagggcggttgtaagatgtgatggggatgtctttatttgcatgccaacgggagcaggg
aaatctctgtgttatcagttaccagctgtgatcgctgaaggagtaaccattgtgatctct
ccactgatagcacttattcaggatcagcttgaacacctgcacatcctgaagatccaagca
cattccttgaactccaagctcagcgcagaggagcggaagatggtcctgtctgacctttgg
tctgcgaaaccccgcattaaactgctctacatcacgcccgagatggccgcctccaacacc
atgggacctgtcattgattcactgctggcccggaagctcctgtcgtacctggttgtcgac
gaggcgcactgtgtgtctcaatgggggcatgacttccgacctgactacctcaagctgggg
ctcttgcgcagcaagatgcccagcgtcccctgtgtggctctgactgccacagccccaaag
caagtacaagatgacaccattgcttctctccagctgaaagagcccattgcaaatttcagg
cgtccatgcttcagagcgaatctattttatgaagttctcttcacagagactctgactcaa
ccctttgtaaatctaaaaggattctgtgaacaggctctagggaagaagaatacttcaggg
aagttcagtggctgtggtataatttactgtcggaccaggaactcgtgtcaagaggtagca
gaggagctgacgcagagaggagtggaggcgaaagcttatcatgctgggctaaagaactca
gaacgcacagaagtgcagcaggagtggatggagggcaaggtgccagtgatcgtggcgacc
atcagctttgggatgggtgtggacaaggcaaatgttaggtttgttgcccattggaatatt
gcaaagtcgatggctgcttattaccaagaatctggtcgagcaggaagagatgggaaacct
tcattctgtcgagtttactactccaggacagatcaaaatagcatcaccttcctgatcaag
aaggagatcgctcagatgcagcacaagagaggctgtgtaaaaaactctgacaaatcctcc
atggtgggctttgaggcgcttgtcaccttctgcgagcagccagggtgtcggcatgcagcc
attgccaaatattttggagatgaaatgccagtctgtaatcgggcatgtgatcactgcaaa
aatccagacactgtgatgaagcaactggatctccttcagaggctcgacatccgcaaggcg
caagcattggttacaaagccagctgctgcagggccattcgggtacatcagtgacttgtat
gcagggggaagaaaaggctatggctttgaaagatatgataatgaagatggtgatagtgga
tcagatgaagaaagtgggcacagaacgaaagaatggaatacgttttatgataagcagatg
aatctgaggaagaatggaaaacctgtaaaggatacctttgtaccaccagatcccgactgt
cccctccgcgatgcagctaatcagaaaataccaaagctctccgtcaaggcacgagaacat
tgtctacacattctggaggaagcactgattatgaataaagggcaggaagacacaaaagca
gagagtgccgaccctcactcatgtgccatagagatggaacatgaagctttcaaagctacc
aagatggcgaatctatataaggcattgatactcagaaaggttgcggaaattaagaagtcg
attcaaaatggactgctgtatccaaaactgacagaaatggacaatagaacatatactacg
gcaatagcagatagcgataaagacaatgaagcattcatttctgcatcacagctctattct
tttaagtcaaagcgtgttgcaggaggagttaagattttgtccagcccattccaaaccgca
ggagatctgctgaagaactctgtgccagtggagagtgagcaaaagaattacacaaacttg
gatgatccgatctacaacttaaacagcacactgaagaaaaatcctcagggttacacacat
ccttctgtagacaacaatgggaagacaaatcaatcctcgcctcttcttgccagtcccaac
aagaaaaaatctaccaaaagcaaattgcttgcagaaagtgccaagaaggactctcagaat
atcactaaattttttcagcaaaacaaatctcaaggagtagccatgaatacaaccaaaagt
ctcagtgatgattatagctctgtagtcaatgatgcgcaagagacggacagcaggaaaaca
ctctcttccactgtggccttttctgaaaaactggaatcattcccagatccaattatagta
actaaaaccagaaatgtggataaatatttgcaatccaatcatcatgtggaagaaaagacc
agcgacagactcggaagcctaggaaaagctcctgatgtgagcagccaattgtggcatggc
actcattccgctggtgagaaaagaatattaacagatgaggaatctggaataatcgatcca
aagcgacggcgaacgagtatcaatccctccattttatatcctcctgatcttaagggcaat
aagatgaagaagaaggttacctttgacccattgcatcaggacagtactgaagtgcttcca
gctgcatcaaaaggaggacaactgaaacagactgcagatattgttgtcaagtgcctaacc
ccttattacaaagagggaaagtttgcttctaaggatttgtttaaagcttttgcacgtcat
ctttctcatttactggctgttggagagaatgcatcgaagaaaaatgtgaaagaagaggtc
cagcaaataatccattgcttctttaaaagtcgccggaagtgtgagagtgaaaatgactgg
agggacctgcatgcatcatag
DBGET
integrated database retrieval system
