Leucoraja erinacea (little skate): 129708333
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Entry
129708333 CDS
T09122
Symbol
itgb4
Name
(RefSeq) integrin beta-4
KO
K06525
integrin beta 4
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04510
Focal adhesion
leri04512
ECM-receptor interaction
leri04810
Regulation of actin cytoskeleton
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129708333 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129708333 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129708333 (itgb4)
04810 Regulation of actin cytoskeleton
129708333 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leri04147
]
129708333 (itgb4)
04515 Cell adhesion molecules [BR:
leri04515
]
129708333 (itgb4)
04090 CD molecules [BR:
leri04090
]
129708333 (itgb4)
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129708333 (itgb4)
Exosomal proteins of bladder cancer cells
129708333 (itgb4)
Cell adhesion molecules [BR:
leri04515
]
Integrins
Integrin beta subunits
129708333 (itgb4)
CD molecules [BR:
leri04090
]
Proteins
129708333 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Pur_ac_phosph_N
Integrin_B_tail
Calx-beta
I-EGF_1
EGF_2
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
129708333
NCBI-ProteinID:
XP_055509984
LinkDB
All DBs
Position
23:18881795..18969519
Genome browser
AA seq
1965 aa
AA seq
DB search
MLIQFIQHRSNDLQILGDPGYGDNAAKCRSATVKGGTGAEGRVASISSYYLLVRPKIFHY
NYKSDAQIYKVSIVNVFELRCRQARLCLIPVEFGAATVGPGLREMEQWKMLVSFLMVVLL
AAGCQGNHCTASRAKTCTLCIRVAEDCSYCADKNFTLPRCDLASNLLSSCKKIVAMKSEM
HIIQSTRIDTSSKRTQISPQQVSMSLRAGEERTLNFEVFQPLESPIDLYFLMDFSYSMQD
DLDNLKKLGLRLADVVKNMSNDYTIGFGKFVDKVSVPQTDMRPLRLKQPWPNSDAPFSFK
NVIPLTSNVNSFIEKLQKERISGNMDAPEGGFDAILQVAVCKGDIGWRPDSTHLLVFSTE
SAFHYEADGSNVLSGILERNDEQCHLDNSGSYTQDTEQDYPSIPTLIRLLSKHGIIPIFA
VTNHSYSYYEKLSKYFPVSDIGQLQEDSSNILDLLRHAFENIRSKMEIRANRVPKTMRAS
VSSLSAAKPQSESSTFTVIPGQVNKFRLSLKALENDGDIHLCNMPQGDQEGTIILKPSTS
TDSLSLDASLLCAQCPCEKKPEVDSPLCSSNGNFVCGQCQCKENWRGLRCDCLMGVEGNI
ADCIDPKGNSSVPCSRHGECQCGICHCLPSEKHLEHFDGKYCQYSNLLCPRYAGFTCNDR
GKCFQEKCLCDDGWTGPSCECPISNATCIDPNGGLCNGKGICECGRCKCEDKNVDPTCGA
NTYLQLLGLCEDTRTCVQCQAWNTGEKKGQNCNKCDDVFEFVEELKEDKEVTESCQFRDE
DDDCTYYYTVEKLPNINTTYLQVRKKKDCPPGGFLWLIPLIMFLMMLLGLLLLLCWKYCA
CCRACCAKLPCCAMLPCCAGGTLVGFKEDHYMLRQSKLTSNSLDTPMVRTNKLDGTDIVR
WKVTDNVHKGATAHSQLISPKDSVLYNLSLRAARVFNNELINPDSRESEQLRLLADENLN
EVYKHIPGAQTVQKTKFRTQPHAGKRSDLTIIDTQLPAPRSAEPEIMKLTEHQVTMGTFN
DLKVVPGYYTVASDRGARGQVEFQDGVELVDVRVPLFVKDEDDDEKRLLVEAVDVPLGTA
EITKRFVDIPIIKEAAKSSISFLQPSYTCQRQDKVANITLLREITEDGRTQVSYKTRDLT
AKDGTDYISMENEVTFLPGETRKEIPVKLLEQTEVDSLLGNEQIKQFLLELYKPRNGAKL
GKFPRTTVTIGDDNVRHRMDLNQSLFPIDSPPLNVKPQPIDSKRIRVNWSPAQGDVTGYK
LKYWPEDDEFSSKTVETRNTSVELTDLQPSCDYAMEVSAYNTLGADCSNTVSRTLDSASE
TIPLKQGLTSIDAPPSNVKVQPINSKKLRVNWIPPPGRPTGYKVTYWIEGDENSSQVVTT
TTPSAELPDLYPYCDYEMNIFAYNALGAGPRSETVSCRTPEDLPNEPGRLAFNVLSPTVT
QLSWAEPSEANGEIVEYEVSYTVVTDENQPIGPKKMAKINKPKKRMVMIENLKEEQPYRY
AVRARNGAGWGPPREATMNLSTQPKRPMSIPIIPDIPIIDAEAHDEYENFLMYSSDVMRS
PRPSVSDDTDMQMNGRWETNTTFSGGTQGTITQNTGIHSQQFTRTIGGVSETLAPGQGQW
LSAQGPPMHGMQGVDYTVTQRMIGGRRRTESEDVNAALENLEMALHENRSPGVPNTPTRL
VFSALGATSLKVSWQNPPCEREVLAYRVTYQSLAGGEMQTVDIPDPNENSLIINDLLPNY
SYMFKVKALSDKGWGPDREGVITIESKVDPMSPLSPIPGSPFTLSTPSAPGPLVFTAINS
ELLKLSWEKPRKPNGDIMGYLVTCEPLGGQDETKTYQVEGDDAEMTLMVPHLSENVPYKF
KVQAKTTQGFGPEREGIITIESQDAGSISKFSKQTVMRNEGFTMPGNMSTETSLMQSTTD
PFFSDGMTVTTQRMEGGTSVTQQVTRTMMTSGTVTKQVERKFYEA
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atgttgattcagttcattcagcacagatcgaatgatttacagatattaggggatccggga
tatggggacaatgcagccaaatgtagatcagccacggtgaagggtggaacgggcgctgag
ggccgagtggcctcgatcagttcctattaccttctcgtcaggccaaagatctttcattac
aattataaatcagacgcacagatttataaagttagtattgtgaatgtgtttgagttgaga
tgtcgccaagcgcgcctgtgcctaatacctgtggagtttggcgctgcaacagttggtccc
gggcttcgggagatggagcagtggaagatgttggtctcgttcctgatggttgttctcctt
gcagctgggtgtcagggcaatcactgcactgccagtcgagcaaagacctgcaccttgtgt
atcagagtggctgaggactgttcatactgtgctgacaagaacttcacgttgcccaggtgt
gacctagcgagcaatctcttgtccagctgtaaaaagattgtcgcaatgaagtccgagatg
cacataattcagagcactcggattgataccagtagcaaacgcacccagatctcaccacag
caagtgtccatgagcctgagggccggagaggagaggaccctgaacttcgaggtgttccag
ccactagaatctcccattgacctctacttcctcatggacttctcctactccatgcaggat
gatttggacaacttgaagaagttggggcttcggctggctgatgtagtgaagaacatgtcg
aatgactacaccatcggctttgggaagtttgttgacaaggtgtctgttccacagacagac
atgaggccattgagacttaagcagccttggccaaacagtgatgccccattctccttcaag
aacgtcattcctctgaccagcaatgtaaacagtttcatcgagaagctgcagaaggaaaga
atctcgggcaacatggacgcacctgaaggtggatttgatgcaattctgcaggttgcagtc
tgcaagggtgacataggttggaggcctgacagcacccatctgctggtcttctcgactgaa
tctgcctttcattatgaagctgacggctccaatgtcctctcgggcatcttggaaaggaat
gatgagcaatgtcatttggacaacagtggcagttacacccaggataccgagcaagactac
ccttccatcccaactctgatacgccttctcagcaagcatggcattattcctatctttgct
gttactaaccattcatattcctactatgagaaattgagcaagtattttccagtgtctgat
atcgggcagctgcaagaggactcgtccaatatactcgacctgctgcgccatgcatttgag
aacatccggtcaaagatggagatccgggctaacagggtccccaaaacaatgagagcctct
gtctcatcgttgtcggcggccaagccgcagagcgagtcgtccaccttcaccgtcatcccg
ggacaggtgaataagttccgcctcagtttgaaagctttggaaaacgacggtgacattcac
ctgtgcaacatgccccagggcgaccaggagggaactattattctcaaacccagcacttcc
accgactctctgtcgcttgatgcctcactgctgtgtgcccagtgcccttgtgagaagaaa
ccagaggttgactcgcccctgtgcagttccaacggtaactttgtctgcggacagtgccag
tgcaaggagaattggcggggtcttcgctgtgactgtctcatgggcgtggagggaaacatt
gctgactgcatcgaccccaagggaaacagcagtgtgccttgctctagacatggggagtgt
cagtgcgggatctgccactgcctcccctcagagaaacatctagaacactttgacgggaag
tactgtcaatacagcaacctgctgtgcccgcgctacgccggcttcacgtgcaacgatcgg
ggtaaatgctttcaggagaagtgcctttgtgacgatggatggacgggtccctcatgtgaa
tgtccgatcagtaacgctacctgcatagatcctaacggagggctgtgcaacggcaaaggc
atttgcgagtgtggacggtgcaagtgtgaagataaaaacgtagacccgacctgcggtgcc
aacacctacttgcaactgctcgggctgtgtgaagacactcggacttgtgtccaatgccag
gcctggaacactggggagaagaaagggcaaaactgcaataagtgcgacgatgtgttcgag
tttgtggaagaactgaaggaagacaaggaggtgacggagagctgccagttccgtgacgag
gacgatgactgcacctactattacacggtggagaaactcccaaacatcaacaccacctac
ctccaggtgcggaagaagaaagactgccctcccggaggctttctctggctcatcccgctc
attatgttcctgatgatgctcctgggcctgttgctgctgctgtgctggaaatactgtgcc
tgttgccgggcctgctgtgcaaagctcccctgctgtgccatgctgccatgctgtgctgga
ggcaccctggtggggtttaaggaagaccactacatgctccgtcagagcaagctcacctcc
aactccctggacacgccgatggtgcggaccaacaaactggacgggacggacattgtgcgg
tggaaggtgacggacaatgtgcacaagggagccactgctcactcccaactcatcagcccc
aaggactctgttctctacaacctgtcgctgcgggcagcccgagtgttcaacaacgagctg
atcaacccggactccagggagtctgagcagcttcggctcctggcggatgaaaacctcaac
gaagtgtataaacatattccaggggctcagactgtccagaaaacgaaattcaggacccag
ccacatgcaggaaagaggtcggacctgaccatcattgacactcagctgccagcgccccgt
tcagcagaaccagagatcatgaagctcactgagcaccaggtcaccatgggaaccttcaac
gatctgaaagtcgtcccgggctattacacagtggcgtctgatcgaggtgcccggggccag
gtagagttccaggatggggtggagctggtggacgtgcgggtgccgctctttgtgaaggac
gaggatgacgatgagaagcggctgctggtggaggcggtggacgtgccgctgggaacggcg
gagatcaccaagcgcttcgtcgacatccccatcatcaaagaggccgccaagagcagcatc
agcttcctgcagccttcctacacgtgccagcggcaggacaaggtggccaacatcactctg
cttcgtgaaatcaccgaggacggacgcacccaggtctcctacaaaacacgagacctcacc
gccaaggacggcacggattacatttcaatggaaaacgaagtcaccttcctccctggggag
acacgcaaggagattcccgtcaaactgctggagcagacggaggtggactccctcctgggc
aacgagcagatcaaacagttcctgctggagttgtacaaaccccgtaatggtgcgaagctg
ggcaagttcccccgcaccaccgtcaccatcggcgatgacaacgtaagacataggatggat
ctcaaccaatcgctgttcccaattgattcgccgcccctcaacgtgaaaccacagccaatt
gacagcaagaggatccgtgtgaactggagcccagcccagggggatgtgacgggttacaag
ctgaagtactggcctgaagacgatgagttctcctctaagacggttgagacgaggaacacc
tcggtcgagctcaccgacctccagcccagctgtgactacgcgatggaggtgtcggcctac
aacacgctgggcgccgactgctccaacaccgtgagccgcacgctcgacagtgccagtgaa
actattccactcaagcagggtttgacctccatcgacgccccaccctccaacgtcaaggtg
cagccaatcaacagcaagaagctccgcgtgaactggatcccgcccccgggtcgaccaacc
ggatacaaggtgacctactggatcgaaggggacgagaattcctcgcaggtcgtgaccacc
accacaccgtccgctgagctcccagacctgtacccctactgcgactacgagatgaacatc
tttgcctacaacgccctgggcgccggcccccgctccgagaccgtcagctgccgcacaccg
gaagacctacctaatgagccgggtcgattggcgttcaacgtcctttcacccacggtgaca
cagctgagctgggctgagccgtcggaggccaacggggagattgtggagtatgaagtgagc
tacaccgtggtgaccgacgaaaaccagccgattggaccaaaaaagatggcgaagatcaac
aagccaaagaagaggatggtgatgatcgagaacctgaaggaggagcagccgtatcgctac
gcagtgcgggccaggaacggggctggctggggtccccctcgagaagccacaatgaacctg
tcgacgcaaccaaaacgaccgatgtccattcctatcatcccagatattcccatcattgac
gctgaggcacacgatgagtacgagaatttcctgatgtacagctcggatgtcatgcgatca
cccaggcccagcgtctctgacgatacagacatgcagatgaacgggaggtgggagacgaac
acgacgttttccggaggtacccagggcacgatcactcagaacactggcattcacagccag
cagttcacacggaccatcgggggggtctcggagaccctggcgccagggcagggtcagtgg
ttgtctgcacagggaccaccaatgcatggaatgcagggagttgactacacggtcacacaa
cggatgattggcgggaggagacgtacagaatctgaggatgtgaacgctgctcttgagaac
ctggagatggctcttcatgaaaaccgctctccgggggtccccaacaccccgactcgcctg
gtcttctctgcgctgggagcaacctcactgaaggtcagctggcagaaccctccgtgcgaa
cgagaggtcctggcctaccgcgtcacctaccagtccctggcaggaggtgagatgcaaact
gttgacatcccagaccccaatgaaaactcgctgattatcaatgaccttctgcccaactac
tcctacatgttcaaggtcaaggccctgagtgacaagggatggggtccggaccgcgaagga
gtcatcaccatcgaatccaaagtggacccaatgagtcccctcagcccgatcccaggttcg
ccgttcacactgagcacacccagtgcccctgggcccctggtgttcactgcaatcaactcc
gagttgctcaaactgagttgggagaaaccccgaaaaccaaatggagatatcatgggttac
ctggtgacctgtgaacccttgggcgggcaagatgagaccaagacgtatcaagtggaagga
gatgatgcagagatgactctaatggtgccacatctcagcgagaacgttccatacaagttc
aaggttcaagccaagaccacgcagggctttggtccagagcgggaagggatcatcaccatc
gagtctcaggatgcaggaagcatttccaagttcagtaagcagacggtgatgaggaatgaa
gggttcacaatgcctgggaacatgagcacagagaccagcctgatgcagtccaccaccgac
cccttcttctcagacgggatgactgttacaacacaaaggatggaaggagggacgtccgtc
acccagcaggtcactcggaccatgatgaccagtggaaccgtcaccaaacaagttgaaagg
aagttctacgaggcctga
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integrated database retrieval system
