Leclercia sp. W6: DVA43_03295
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Entry
DVA43_03295 CDS
T08905
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
ley
Leclercia sp. W6
Pathway
ley03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DVA43_03295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ley03400
]
DVA43_03295
DNA repair and recombination proteins [BR:
ley03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DVA43_03295
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GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH
HHH_5
HHH_3
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AXF58641
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Position
670776..672608
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AA seq
610 aa
AA seq
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MSEVFDSSAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV
AQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSSDTHPRLATHRG
AKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVE
GLVSEEEYAQQVEYVRLFLAGKDDQVLNQLIARMEKASQALNFEEAARIRDQIQAVRRVT
EKQFVSNTGDDLDVIGVSFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFV
GQFYLQGSQMRTLPSEILLDFNLSDKTLLSDSLSELAGRRVNVQTKPRGDRARYLKLART
NAATALTTKLSQQSTVHQRLIALATVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGP
LRAEYRRYNITDITPGDDYAAMNQVLRRRYGKAIEESKIPDVILIDGGKGQLAQAKSVFA
ELDVSWDKHHPLLLGVAKGTDRKAGLETLFLEPEGEGFSLPPDSPALHVIQHIRDESHAH
AISGHRKKRAKVKNTSTLETIEGVGPKRRQMLLKYMGGLQGLLNASVEEIAKVPGISQGL
AEKIYYSLKH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaagtgtttgattccagtgctttcctgaaaaccgtcaccagccagccaggcgtc
taccggatgtatgacgcaggcgggacggttatttacgtcggtaaagcgaaagatcttaag
aagcgtctttccagctatttccgcagcaatcttgcctcccgcaaaactgaagcgctggtc
gctcagatccagcagattgacgtcactgtgacccacacagagaccgaagcgctgttgctg
gagcataactacatcaagctctaccagccgcgttataacgtgctgctgcgtgacgacaaa
tcctacccgtttatttttctcagcagcgatacccatccgcgtctggctacccatcgcggt
gccaaacatgcgaaaggcgaatatttcggcccgttccccaacggctatgccgtgcgggag
acgctggccctgctgcaaaagattttcccgattcggcagtgcgaaaacagcgtctatcgc
aaccgctcccgtccctgtctgcagtaccagataggccgttgccttggaccctgcgtggaa
gggttggtcagcgaagaggagtatgcccagcaggtggaatatgtgcgcctgttcctggcc
ggtaaagacgatcaggtgctgaaccagcttattgcccgcatggagaaggccagccaggcg
ctgaactttgaagaggcggcgcggatccgcgatcagatccaggcggtacgacgagtcacg
gaaaaacagtttgtctctaataccggcgatgacctggacgtgattggcgtgtcgttcgat
gcgggcatggcctgcgtacatgtactctttatccgccagggtaaggtgctgggcagccgc
agctatttcccgaaagtgccgggcggtaccgaactgggtgaagtggtcgagacctttgtt
ggccagttctatttgcagggcagccagatgcgaaccctgccgtcggaaattttgctcgat
tttaatctcagcgataaaacgctgctgtcagattcgctgtcggagctggctgggcgtcgg
gttaacgtccagactaaaccgcgcggcgatcgtgcccgctacctcaagctggcgcgcacc
aatgcggcaacggcgttgaccaccaaactgtcgcagcagtcgaccgttcatcagcgtctt
atcgcgctggcaaccgtgcttaagctgccggaagtgaaacggatggagtgtttcgacatc
agccacacgatgggggagcagacggtggcctcctgcgtggtatttgatgctaacggaccg
ctacgcgcggagtaccggcgctacaacattacggatatcactcccggtgacgattacgcg
gccatgaaccaggtgctgcgccgtcgctatggtaaagctatcgaagagagtaagatcccg
gacgttatcctgattgacggtggtaaaggccagctcgcccaggcaaaatccgtttttgcc
gaactggatgtaagctgggataagcatcatccgctgctgctgggcgtggcgaaaggcacc
gatcgtaaagccgggctggagacgctgttccttgagccggaaggggagggctttagcctg
ccgccggactcacctgcgctccatgtgatccagcatattcgcgatgagtcgcacgctcat
gccattagcggtcaccgtaaaaaacgggcaaaggtaaaaaataccagcaccctggaaacg
atcgaaggggtcgggccaaaacgtcgccagatgttgctgaaatatatgggcggtttgcaa
ggattactcaatgccagcgtagaggaaattgcaaaagtgccaggtatttcgcaagggctg
gcagaaaagatctactactcgttgaaacattga
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