Laceyella sacchari: C1X05_06705
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Entry
C1X05_06705 CDS
T05304
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
lfb
Laceyella sacchari
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
PAS_4
HTH_8
PAS_8
AAA_5
AAA
AAA_2
PAS_10
HTH_30
PAS_7
Mg_chelatase
AAA_3
DapB_N
bpMoxR
Spc29
Bac_DnaA
HTH_50
AAA_16
sCache_3_3
nSTAND3
Parvo_NS1
AAA_7
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AUS08553
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Position
1320809..1322848
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AA seq
679 aa
AA seq
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MQTFLIVGGGEDGKTVLDMLASVDFIAVVGMVDAAPDAPGLVEARKRGIPTSTDMHTFLA
PPPDVILDVTDADEVEGRLKEMAPPQTHVISGAVARLMVKLVGQAWKRRQNELEAIVNST
HDGMIAVNQRGEVTLFNKAAGRMTGVDPAKSLGKPVTEVIPNTRLGVVIKEGISELNRRQ
TLENGLEIITSRVPVKAPDGKVIGAVAVFRDISEIKQLTQQVLDLESMKSMLQAIINSSD
DAISVVDQDGMGILINPAYTRLTGLTPEQVIGKPAETDISEGESLHKKVLKTRQPARGVH
MKVGPHHKEVVVNAAPIIIGDELKGSVGIIHDVTELKQLSRDLERARRIIRTLEAKYTFE
DIIGNSESMCHSLAQAKQAAQTRATVLLRGESGTGKELFAHAIHNASDRKYNQFVRVNCA
TLSESLLESELFGYEEGAFTGAKRGGKKGLFEEASGGTIFLDEIGELSLSTQAKLLRVLQ
EKEVLRVGGTKSIPVDVRVIAATNVYLEKAIQEKRFREDLYYRLNVLPIHIAPLRMRKED
LYDLSLHLIKKFNQEYGRQVEEIGEDAIHVLSQYDWPGNVRELENVLGRAMINMAFNERR
MRREHIPPLDLSRMIQPSAAPSVPDAIVGKPLKEVLAQTERDYILQVVAACGQNKTEAAR
RLGISIRSLYYKLERYGVL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaacttttttgatcgttggaggcggcgaagacggcaaaacggtgttggacatgttg
gcttcagtcgactttattgctgtggtcggcatggtggatgcagcgccggatgcccccggt
ctggtggaggcgcgcaagcgggggattccaacttccacggatatgcatacgttccttgct
ccccctccggatgtgattttggacgtgacggatgcagatgaggtggaggggcgtctaaaa
gaaatggcgccacctcaaacacatgtgatttccggcgctgttgcccgattgatggttaag
ctggtgggacaagcgtggaaacggcggcaaaatgaactggaagcgatcgtcaattcgaca
catgacgggatgatcgccgtcaaccaacgcggagaagtgacgctgttcaataaggcggca
gggcgaatgaccggcgttgatccggcaaagtctttgggaaaaccagttactgaagtcatc
cccaacacgcgtttgggcgtggtcattaaagaagggattagtgaattgaatcgccggcaa
acgctggaaaatggattagaaatcattaccagtcgtgtgccggtcaaggcaccggacggc
aaagtgatcggagccgtcgccgtctttcgcgacatcagcgagatcaaacagctcacacag
caagtgcttgatttggagagtatgaaaagcatgttgcaggcgattatcaactcctctgat
gacgccatttccgttgtggatcaagatggcatgggcatactgatcaatcccgcctacacc
cggctgactggactaacccctgaacaggtgatcgggaaaccggctgaaacggacatttcc
gaaggggagagcctgcacaaaaaagtgttgaaaacgcgtcaaccggcacggggggttcac
atgaaagtaggcccgcaccacaaagaagtggtggtaaatgcagctcccatcatcatcgga
gatgagttgaagggaagtgtgggcatcatccacgatgtcaccgagttgaagcaattgagt
cgcgacttggaacgggcgcgccgcatcattcgcaccttggaggcgaaatacacatttgag
gacatcatcggcaacagtgagtcgatgtgccactccctggcacaagcgaagcaagcggca
caaacgcgggcgacggtgctactacgcggggaatccggcacgggcaaggagttgtttgcc
catgcgattcacaatgcgagcgaccgtaaatacaaccagtttgtgcgtgtcaattgtgcc
accttgtccgagtcgctattagagagtgaattgttcgggtatgaagaaggggcatttact
ggagccaaacggggcggaaaaaaaggcttgtttgaagaggcgagtggaggcacgattttc
ctggatgagatcggggaattgagcttaagcacccaagccaagctgttgcgagtgttgcaa
gagaaagaagtgctccgggtcggaggcaccaaatcaattcctgttgatgtgcgcgtcata
gcggcgacgaatgtgtatctggaaaaagcgattcaggaaaaacgcttccgtgaagatctg
tattaccggttgaatgttttgcctatacatattgccccgcttcgcatgcgcaaagaagat
ttgtatgatttatccctgcatttgatcaaaaagtttaatcaagagtacggccggcaagtc
gaagaaatcggagaggacgctattcacgtgctatcccagtacgattggcctggaaatgtg
cgcgaattggagaatgtgctggggcgggctatgatcaatatggcgttcaacgaaagacgc
atgcggcgcgaacatattccaccactggacctttcccgcatgatacaaccgtcggcggca
ccctctgttcccgacgcaatcgtcggcaaaccgctgaaagaagttttggcgcaaacggaa
cgggactacattttgcaggtggttgcggcatgcggccaaaacaaaacggaagcggcgcgg
aggttaggaatctccattcgcagcctctattacaaattggagcggtatggggtgctgtaa
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