Limosilactobacillus fermentum IFO 3956: LAF_0004
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Entry
LAF_0004 CDS
T00699
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LAF_0004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfe03400
]
LAF_0004
DNA repair and recombination proteins [BR:
lfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LAF_0004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_27
DUF2813
AAA_29
ABC_ATPase
SbcC_Walker_B
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
BAG26340
UniProt:
B2GEV1
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All DBs
Position
3071..4192
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AA seq
373 aa
AA seq
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MILQELQLSHYRNYEELAVTFAPGINVLIGENAQGKTNLLEAIYLLAFTKSHRTAKDREL
IGWHQKLARVSGVVERASGRLPLEVQISTSGKRVKVNHLFQKRLSTYVGNLNVVLFAPED
LALVKGAPVNRRQFMDMEFGQMSSKYLYNVSRFNQQLAQRNAYLRQFKYGQQSDRILLGV
ITDQLASVGGEVVVARQQLVKRLGKWAAELHHHISKQKEELSLQYVSQVEVDDQTTEEEA
VAQLRRLYSENEEREIEHGTSLIGPQRDDIHFIVNGQNVQRFGSQGQQRTTALAVKLAEI
DLMKEQTGEYPLLLLDDVLSELDDDRQTHLLTAIQDKVQTFITTTSLSGVARQLIHHPTI
FTIQSGTLTKEEN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgattctccaggagcttcagttaagtcattaccgtaactatgaggaactggcggtgacc
tttgcgccggggatcaacgtcttaattggagaaaacgcccaggggaaaaccaacctactg
gaggccatctacctgttggccttcaccaagagtcaccggacggccaaggaccgggagtta
attggctggcaccaaaagctggcccgggttagcggcgtggttgagcgagcgagcggccgc
cttcccttagaggtgcaaatctccaccagtggcaagcgggtaaaggtcaaccacctcttt
caaaagcggctttccacttacgttgggaacctcaacgtagttttgtttgcccccgaagac
cttgccctagttaagggggcaccggtgaaccggcgccagtttatggacatggaatttggc
cagatgagtagcaagtatttgtacaacgtcagccgcttcaaccagcagctcgcccaacgt
aacgcctacttgcgccagttcaagtatggccaacaaagtgatcggattttactcggggtg
atcacggatcaactcgcttcggtggggggcgaagtagtggtggctcgccaacagttagtc
aagcggttgggaaagtgggcggctgaattacaccaccacatttccaagcaaaaagaagag
ctgagcttacagtacgttagccaagttgaagtggacgatcaaacgaccgaagaggaagcg
gtcgcccaactgcgccgcctctattcagaaaacgaggagcgagaaatcgagcacgggacc
agcctgattggcccgcagcgcgatgacatccacttcatcgtcaacggtcaaaacgtgcaa
cgcttcggttcccaaggccaacagcggaccaccgctttggccgttaaattagccgagatt
gacctgatgaaagagcagaccggtgaataccccctgctcttgttagacgacgtcttgtcc
gagttagatgacgaccggcaaacccacttactgacggcgattcaagataaggtgcaaacc
tttatcaccactactagtttgagtggggtggctcggcaactaattcaccacccaaccatc
ttcacgattcaaagtggcacactcacaaaggaggaaaactag
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