Limosilactobacillus fermentum IFO 3956: LAF_0452
Help
Entry
LAF_0452 CDS
T00699
Name
(GenBank) hypothetical protein
KO
K20391
HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LAF_0452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lfe03000
]
LAF_0452
Transcription factors [BR:
lfe03000
]
Prokaryotic type
Helix-turn-helix
Other families
LAF_0452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
RNPP_C
HTH_3
HTH_31
TPR_1
TPR_MalT
TPR_7
ANAPC3
HTH_19
TPR_10
DUF2225
HTH_26
Motif
Other DBs
NCBI-ProteinID:
BAG26788
UniProt:
B2GAV6
LinkDB
All DBs
Position
531868..532758
Genome browser
AA seq
296 aa
AA seq
DB search
MSNQTTIRYRKEVIIMRLKGEVLKQVRRKRGLSQTALAEGICTQATISLMEKQNRIPKMN
ILTSLCARLDIPVDRIIENDDVSMTVFFDQISLMLVNHDFEGARKKLNRVKVKKLQNDFD
KQHYYYLLGMLQVASDQVDDAIFNFELILTQFSTTSANIYLAMTTIGMALAYEKRGDTEK
ALQFVGRAIHLIDDKQLNGGKRQWIILYHEISGLYYRLGQYRRAISMAGRGIKICREEQT
LFLLGGLYMTRGQAQAKLGQGDVAQESLTVALSIYKIMEDDTAQETLSQELSQLVE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaatcaaacaaccatacgatacagaaaagaagtgattataatgcgattaaaggga
gaagttttaaaacaggtacgccgtaagcggggattgtcccaaacggcgttggccgaggga
atttgtacccaagcgaccatttccttaatggaaaagcaaaaccggattccaaagatgaat
attttaacgtctttgtgtgcccgcttggacattccggtggaccggatcatcgaaaacgat
gacgtttcaatgacggtcttctttgatcaaatcagtttgatgttagtcaaccatgacttt
gaaggagcccgcaagaagctgaaccgggtgaaggtcaagaagctacaaaatgattttgac
aagcaacactactactacctcttggggatgctccaagtggcgagtgaccaagtggatgat
gccatctttaactttgagctgattttgacgcaattctccaccaccagtgccaacatctac
ttggccatgaccacgatcgggatggccttggcatacgagaagcgcggtgacaccgaaaag
gcgctccagtttgtcgggcgggcaatccacctgatcgatgacaagcagcttaacggtggt
aagcggcaatggatcatcttgtaccacgagatttccggcctgtactatcgtttaggccag
taccggcgggcaatttcaatggctggacggggaattaagatctgccgggaagagcaaaca
ctcttcttattgggtggtctttacatgacccgtggccaggcgcaagctaagttaggccag
ggcgacgtggcccaggaaagcttaaccgtcgccctttcaatctacaagatcatggaagac
gacaccgcacaagagacgctctcacaagaattgagtcaattagttgaataa
DBGET
integrated database retrieval system
