Limosilactobacillus fermentum IFO 3956: LAF_1288
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Entry
LAF_1288 CDS
T00699
Name
(GenBank) phenylalanyl-tRNA synthase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LAF_1288
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lfe01007
]
LAF_1288
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfe03016
]
LAF_1288
Enzymes [BR:
lfe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
LAF_1288
Amino acid related enzymes [BR:
lfe01007
]
Aminoacyl-tRNA synthetase
Class II (U)
LAF_1288
Transfer RNA biogenesis [BR:
lfe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LAF_1288
Prokaryotic type
LAF_1288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
BAG27624
UniProt:
B2GD92
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All DBs
Position
complement(1471471..1473909)
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AA seq
812 aa
AA seq
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MKVSYQWLNHYLPLEQNGITPTELAEKIARTSVDINDVYSPQNGLQKVVVGLVESIKDHP
QSDHLHIAQVKVAEDTTVQIVCGAPNLVAGKKVITALAGAKLADGTKIKKSKLRGEESNG
MLCALQEIGFTDKVAPKAYEEGLWYLPDDAEVGAPVFSYLGMDDTIIDTDVTPNRGDMLS
IYGNVNDLAAIYALDNGFTSHEVVENGTERTADLIKATVADQQLAPTYKLRVIKNVHIQD
SPLWLQIRLWNAGIRPINNVVDVTNYILVKYGQPLHSFDYDRLTSHEIKVRHAAEGEQFT
TLDGEEQTLASQDILVCDGDRPAALAGTMGGQDTKVTDQTVNVALEAAIFDPVMVRKQAR
RLDLHSESSMRFERGINPETVEVALNEAAYWLSELAGGEVTKGIVTATEEAVQVTSIELS
TKRVNAVLGLSLSQADLVNLFDRLRFASQALDDDRLLVQVPARRWDIAIKADLYEEITRL
YGYDNIPSTLPTGTQTLGGLNERQRFLRASRHVMQGVGLNQAISYSLLTAEQAAQFQVNP
QAGQPMLLDYPMSSDHVATRMNIVAGLLIDIAYNVARQVDNVALYEQGRVFLPVAGQERP
TEEEHIAGAVTGSLTAASWNQADDDNQVDFFTVKGIVERYLRNMAVEGEISYQANHDRAD
LHPGRCADVLLDGQVVGYIGQVHPTVAKQYRVPVTYVFELNLEPLLQADKRDKHYQLISK
YPAITRDVALLVDQKVTNAQIVTAIKEVGGPYLKAVHLFDLYKGNFLPANKKSLAYTLTY
QADQGTLTEDQVNEAFDKVIAHLKDQVQAEIR
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatcataccagtggttaaaccactacttgccgcttgaacaaaacgggatcacc
ccgacggagttagccgaaaagatcgcccggacctccgtggacattaacgacgtatactca
ccgcaaaacggcctgcaaaaggtggtggtcggcctggtcgaatcgatcaaggaccacccc
caatctgatcacttgcacattgcccaggtgaaggtggccgaagacacgaccgttcaaatc
gtgtgtggggcgccaaacctggtcgccggtaagaaggtgatcaccgccctggccggggcc
aagctggccgatggcactaagattaagaagagcaagctgcgcggcgaagaatccaacggg
atgctgtgtgccctccaagaaatcggcttcaccgataaggtagcaccaaaggcctacgaa
gagggcctttggtacctgccggacgacgccgaagtcggggcgccggtcttttcatacctg
gggatggacgacacgatcatcgataccgacgtgacgccaaaccggggcgacatgctgtca
atttacggtaacgtcaacgacctggccgccatttacgccctggacaatggtttcaccagc
catgaagtggttgaaaacggcaccgaacggactgccgacctgatcaaggcgaccgtcgcc
gaccaacaactggcgccgacttacaagctgcgggtgatcaaaaacgtccacattcaagac
agtcccctgtggctgcaaatccgcctgtggaacgccggcatccggccaattaacaacgtg
gtggacgtaaccaactacatcctggttaagtacggtcaaccgctgcactcctttgactac
gaccgcttgaccagccacgaaatcaaggtccgtcacgctgcggagggcgagcagttcacc
accctggacggggaagaacagaccctggctagccaagacattctggtgtgtgacggtgac
cgcccggccgccctggcggggacgatggggggccaagacaccaaggttaccgaccaaacc
gtcaacgtcgccttggaagccgccatctttgacccggttatggttcgtaagcaggcccgc
cgcctagacctgcactccgaatcctccatgcgctttgaacgggggatcaacccggaaacg
gtggaagtggccctcaacgaagccgcctactggctgagcgaactggccggcggggaagtc
accaaggggatcgttacggcgaccgaagaagccgttcaggtaacgtcgattgaattatcc
accaagcgggtcaacgccgtcttgggcctgtcactgagccaagccgacttggtgaacctc
tttgaccgcctgcgctttgcaagccaggcgcttgacgatgatcggctgctggtgcaagtg
ccggcccgccgctgggacatcgccattaaggccgatctgtacgaagaaattacccgcctg
tacggctacgacaacatcccgtcaaccctgccgaccggcacccagacgctgggggggcta
aacgaacggcaacgcttcttacgggcgtcgcggcacgtaatgcaaggggtcggtttaaac
caagccatctcctactccttactgaccgccgaacaagccgcccagttccaagtgaacccg
caagccggccagccgatgcttttggattaccccatgagttctgatcacgtggcgacccgg
atgaacatcgtggccggcctgttgatcgacattgcctataacgttgctcgccaagtcgac
aacgtagccctttacgaacaagggcgggtcttcttgccggtggctggtcaagaacggccg
actgaagaagagcacatcgccggcgccgtgaccggttctttgacggccgcctcctggaac
caggcagacgacgataaccaagtcgacttcttcaccgttaaggggatcgtggagcgctac
ttgcgtaacatggccgtggaaggcgaaattagctatcaggcgaaccacgaccgggccgat
ttacacccgggccggtgtgccgacgtcttgttagacggccaagtggtggggtacattggc
caggttcacccgaccgtggccaagcagtaccgggttccggtaacctacgtcttcgaatta
aacctcgaaccactgctgcaagccgataagcgcgacaagcactaccagctgatctccaag
tacccggccattacgcgcgacgtggccctcttggtcgaccagaaagtaaccaacgcccaa
atcgtgacggcgatcaaagaagtcggcggaccgtacctgaaggccgtccacctcttcgac
ctgtacaaggggaacttcctgcccgctaataagaaatccttggcctacaccttgacttac
caagccgatcaaggaaccttaaccgaagaccaggttaacgaggcctttgacaaggtgatt
gcccacttaaaggatcaagtccaagcagaaattcgttaa
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