Leptospirillum ferriphilum ML-04: LFML04_2512
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Entry
LFML04_2512 CDS
T02319
Name
(GenBank) putative 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfi03016
]
LFML04_2512
Enzymes [BR:
lfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LFML04_2512
Transfer RNA biogenesis [BR:
lfi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LFML04_2512
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AFS54700
UniProt:
J9ZDB6
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All DBs
Position
2383794..2384408
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AA seq
204 aa
AA seq
DB search
MRTRDQGLPSGTGHTLLRRVFIGLYPTQAGLDQIRQIATNLPRPFSLESPDDLHITLLFG
GDQPEHRKSVWVEAAHQSMRALERFSLLPMGSVALEQHRSILVLRFFGGEKFWGEAAGLA
SHLSWDLLGVRPSRPFWPHMTLSRKVFAPLPPDDRRVLKKDLPDRSLFLGGVRLWTSSPT
RNPNGRRYTALAEFPFQQDQNEHG
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaggacacgggaccagggtttaccctccgggacaggtcacacactcctccggagagtg
tttatcggcctctatccgacacaagcgggccttgaccagatccggcaaatcgcaactaat
cttccccggcccttttctctggaaagtccggacgatctgcatatcacgcttctctttgga
ggcgatcaaccggaacaccggaaatccgtctgggtcgaggcagcccatcaatccatgcgt
gccctggagcgcttttctctccttccgatgggaagcgtcgccctggaacagcatcggtcg
attcttgtccttcgttttttcggtggagaaaaattttggggagaggcggccggtcttgcc
agccatttgtcctgggaccttcttggtgtcagaccctcaagacccttctggccacacatg
actctcagccggaaagtgtttgctcctctcccgccagacgaccgtcgcgtcctgaaaaaa
gatctgccggacaggtctctgtttctgggaggagtccgtctctggacgtcctctccgaca
agaaacccgaatggccgccggtatacagctctcgcggagtttccctttcaacaggaccag
aatgaacacggatag
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