Companilactobacillus farciminis: LF20184_07960
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Entry
LF20184_07960 CDS
T06098
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm00730
Thiamine metabolism
lfm01100
Metabolic pathways
lfm01240
Biosynthesis of cofactors
lfm04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LF20184_07960
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LF20184_07960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfm03016
]
LF20184_07960
Enzymes [BR:
lfm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LF20184_07960
Transfer RNA biogenesis [BR:
lfm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LF20184_07960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
tRNA_Me_trans
DUF6240
Motif
Other DBs
NCBI-ProteinID:
ATO46700
LinkDB
All DBs
Position
complement(1660788..1662005)
Genome browser
AA seq
405 aa
AA seq
DB search
MEYTEIMVRYGELSTKGKNRKSFIDRLHGNVAKVLKDYPDLRMQPHRDRLHINLNGVDAK
PVMEKLKNVFGIQTFSLSVKVSRDFEDVKKKAVEMMHEAYKPGMSFKVGTKRADKTYELD
TNQINLQLGDAICEAFPEIDVEMKHPDIKISVEVRQDGIYLSYLTVKGAGGLPVGTAGKA
MLMLSGGIDSPVAGYLAMKRGVDIEMVHFFSPPYTSEQALNKAKELTSKLTAFGGNIKFI
EVPFAEIQETIKSSVPEGYLMTIQRRFMLRLTDMIREKEHGLAIFNGEAVGQVASQTLES
MAAINDVTTTPILRPVATMDKTEIIRLAEKIDTFNLSIQPFEDCCTVFAPPSPKTRPSIE
KTRHFESVLDIDGLLQRAMDGIKITTVEHGNKFMESDQENINSLL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaatatactgaaattatggttcgctacggtgaactatcaacaaagggtaaaaaccgt
aagagcttcatcgaccgtcttcacggaaatgtagctaaagttttgaaggattaccctgat
cttagaatgcaaccacatcgtgaccgtctacacatcaatttaaacggtgtcgatgctaag
ccagtaatggaaaaattaaagaacgtctttgggattcaaactttctcactcagtgttaaa
gtttcacgtgattttgaagatgtgaagaaaaaagccgttgaaatgatgcacgaagcttat
aagccaggcatgagtttcaaagttggaacaaaacgcgctgataagacttatgagttagat
actaaccaaatcaacttgcaattaggggacgctatttgtgaagctttcccagaaattgac
gttgagatgaaacatcctgatatcaagatttcagtcgaagttcgtcaagatggaatttac
ttatcatacttaacagttaaaggtgctggtggtcttcctgttggaactgctggtaaagct
atgttgatgttatctggtggaattgactctccagttgctggataccttgctatgaagcgt
ggagttgacattgaaatggttcacttcttcagtcctccatacacttccgaacaagccttg
aacaaagctaaagaattaacttctaaattgactgccttcggtggcaatatcaaatttatc
gaagtaccttttgctgaaattcaagagacaatcaagtccagcgtgccagaaggttactta
atgacgattcaacgtcgtttcatgttgagattgactgatatgattcgtgaaaaagaacac
ggtctagcaatttttaacggtgaggccgttggtcaagttgcttcacaaacattggaaagt
atggctgctatcaatgacgtcacaactacaccaatcttgcgtccagtggcaacaatggat
aagacagaaattattcgcttagctgaaaagatcgatacatttaatctttcaattcaacca
ttcgaagattgctgtactgtctttgctccaccatcaccaaaaacacgtccaagtatcgaa
aagacacgtcactttgaaagcgtcttagatattgacggattattgcaacgagcaatggat
ggtatcaagattacaaccgttgaacatggcaacaagttcatggaaagtgatcaagaaaac
atcaacagtttgctataa
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