Lactococcus formosensis: LMK00_02290
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Entry
LMK00_02290 CDS
T08654
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lfo
Lactococcus formosensis
Pathway
lfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMK00_02290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfo03400
]
LMK00_02290
Enzymes [BR:
lfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LMK00_02290
DNA repair and recombination proteins [BR:
lfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMK00_02290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
HHH_5
HHH
IMS_HHH
Herpes_Helicase
UvrD_C
UvrD-helicase
RecR_HhH
nSTAND3
NTPase_1
AAA_12
RsgA_GTPase
AAA_28
AAA_16
T2SSE
MeaB
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
USJ20846
UniProt:
A0A9Q9D7C8
LinkDB
All DBs
Position
471839..474280
Genome browser
AA seq
813 aa
AA seq
DB search
MTEKIYFTGTIEAIFFSNPSNFYKVLLLEVDDTNSDYEDYEIVVTGTIGELIEGDSYTFY
GKLTTHPKYGEQLQVETYEKAVPTSAAGLIKYFSSDKFPGIGKKTAERIVALFPDETVDS
ILSKPEELDDILPLAKKNSFIKRLRDNHGVEKILSKLAEYGIPSKLQFQIHELYKDQTLE
IIAKNPYQLVEDIKGIGFKTADQIAQELGIAADSSDRFRAGLMHIVKTQPLVTGDTYIEA
RDLLQQTIQLLEEARQIEVNPEIVAEEINHLLEDGKMQQEETKIFENSLYFAEQGISEYL
KKLIGRSAQSFSDEKILKNIEQVETKLGIQYDKLQKEAIFQALNSQFFILTGGPGTGKTT
IINGFIETYAQLHDIDLDPGHYHDDVFPILLAAPTGRASRRMNELTGLPAATLHRHLGLN
TDEAIDMESNDLAGSLLIVDEFSMVDTWLANKLLQAIPPSMKVLFVGDADQLPSVGPGQV
FADLLKLPDVPSVRLDKIFRQGAESTIIDLAHEIKEGHLPQDFTSRHPDRSYFEAGTGQV
ANLVTQVATAWKKRGNNPFELQILAPMYKGVAGINTLNSLLQELFNPLEQRQEFNYQDIH
FREEDKVLHLVNDAENNVFNGDLGKIVELIPAKHTESKQDEIVMDFDGQEVCYPRAEWYK
ITLAYAMSIHKSQGSEFSTVVVPMVSSYSRMLERNLLYTAITRARQSLILIGEQKAFAQA
VQKESANRKTYLKERFSGKSESIEKVKNTLEESKSKVSGRVNQPQAKEISLFPEENLALT
SYESNPFLTTDLVNSGSFDPLIGLTEEDFAIFK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaaaatatattttaccggaacaattgaagctattttttttagtaatcccagt
aatttttataaagtacttttactagaagtagatgataccaatagtgattatgaagattac
gaaattgttgtgaccggaacaattggagagttaatagaaggcgatagctatactttctat
ggcaagctcaccacacaccctaaatatggggaacaacttcaagttgaaacttatgaaaaa
gctgtgccgaccagtgctgcgggactaatcaaatacttttcttctgataaatttcctggg
attggtaaaaagactgcagaaagaatagtggctctttttcctgacgaaacagttgatagt
atcttaagtaagccagaagaattggatgacattcttcccttagcaaagaaaaattccttt
attaaaagactgcgtgacaaccatggcgtggaaaagattttatcgaagcttgcagaatat
ggtattcccagcaagcttcaatttcaaattcatgagctttataaagatcaaactttagag
attattgctaaaaacccttaccaattggttgaagatataaaaggtattggctttaaaaca
gcggatcaaatcgctcaagaattgggtattgcggccgatagtagcgaccgttttagagca
ggattgatgcatatagtgaaaacacaacctttagttacgggtgatacctatattgaagcg
cgtgaccttttgcagcaaacgattcaacttttggaagaagcacgtcagatagaagttaat
ccagaaattgtggctgaagaaatcaatcatcttcttgaagatggtaaaatgcaacaagaa
gaaaccaaaatatttgaaaattctctttattttgctgaacaaggcatcagtgaatacctc
aaaaaacttattggacgcagtgcgcaatctttttcagatgagaagatattgaaaaatatt
gaacaagtggaaactaagctaggtattcaatatgataagctgcagaaagaagctattttt
caggccttaaacagtcagttctttattttaactggtggaccaggaacaggcaaaactacg
attatcaatggttttatcgaaacttatgcacagcttcacgatattgatttagatcctggg
cattatcatgatgatgtctttcccattcttcttgctgcacccacaggcagagcaagtcgc
cgtatgaatgaactcactggtttaccagcagcaacacttcatcgccatttaggcttaaat
acggatgaagcgatagatatggaaagcaatgatttggcaggttctctcctgattgtagat
gaattttcaatggtagacacatggctggcaaataaacttttacaagctattccaccgtcg
atgaaggtcctctttgtaggggatgctgaccaattgccatcagttgggcctgggcaagtc
tttgcagatttacttaagcttcccgatgtaccttcagtcagattagataaaattttccgc
caaggcgcagaatcaacgattattgatcttgctcatgagattaaggaaggacacttgcct
caagactttacaagtcgtcatcctgatcgttcctattttgaagctggaacaggacaagtt
gctaatctcgtgacacaagtggcaactgcgtggaaaaaaagaggaaataatcctttcgaa
ttacagattctagcccctatgtataaaggggtagctggaataaataccttaaatagtttg
ttgcaagaattgttcaatcctcttgagcagcgtcaggagtttaattatcaggatatccat
tttcgagaggaggataaagttctccatctggtcaatgatgcagaaaataatgtttttaat
ggtgacttagggaaaattgttgaacttatcccagcaaaacacacagaaagtaagcaagat
gaaattgtaatggattttgatggccaggaagtctgctatcctcgagcagagtggtataaa
ataaccttggcttacgcaatgtctattcataaatcacaagggagtgaattctcaacagtt
gtggttccgatggtttcatcttattccagaatgcttgagcgcaaccttttgtatacagcg
attacgcgagctagacaaagtttgattcttattggggagcaaaaggcttttgcacaagct
gtgcaaaaggaaagtgccaaccggaaaacttacttgaaggagcgattctctggtaaatca
gagtctatcgaaaaagtgaagaatactttggaagagtccaagagcaaggtatctggacga
gtcaatcagccccaagcgaaggaaatttcgctttttcctgaagaaaatctcgcattaacc
tcatatgagagcaatccttttttaacaacagatttagttaattctggatcttttgacccg
ttgattgggttaacagaagaagattttgcgatttttaaataa
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