Limosilactobacillus fermentum CECT 5716: LC40_0319
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Entry
LC40_0319 CDS
T01958
Name
(GenBank) Putative uncharacterized protein
KO
K20391
HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Pathway
lfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC40_0319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lfr03000
]
LC40_0319
Transcription factors [BR:
lfr03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC40_0319
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
HTH_3
RNPP_C
HTH_31
TPR_1
TPR_MalT
TPR_7
ANAPC3
TPR_10
HTH_19
DUF2225
HTH_26
Motif
Other DBs
NCBI-ProteinID:
ADJ40963
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Position
532440..533285
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AA seq
281 aa
AA seq
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MRLKGEVLKQVRRKRGLSQTALAEGICTQATISLMEKQNRIPKMNILTSLCARLDIPVDR
IIENDDVSMTVFFDQISLMLVNHEFEGARKKLNRVKVKKLQNDFDKQHYYYLLGMLQVAS
DQVDDAIFNFELILTQFSTTSANIYLAMTTIGMALAYEKRGDTEKALQFVGRAIHLIDDK
QLNGGKRQWIILYHEISGLYYRLGQYRRAISMAGRGIKICREEQTLFLLGGLYMTRGQAQ
AKLGQGDVAQESLTVALSIYKIMEDDTAQETLSQELSQLVE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaaagggagaagttttaaaacaggtacgccgtaagcggggattgtcccaaacg
gcgttggccgagggaatttgtacccaagcgaccatttccttaatggaaaagcaaaaccgg
attccaaagatgaatattttaacgtctttgtgtgcccgcttggacattccggtggaccgg
atcatcgaaaacgatgacgtttcaatgacggtcttctttgatcaaatcagtttgatgtta
gtcaaccatgaatttgaaggagcccgcaagaagctgaaccgggtgaaggtcaagaagcta
caaaatgattttgacaagcaacactactactacctcttggggatgctccaagtggcgagt
gaccaagtggatgatgccatctttaactttgagctgattttgacgcaattctccaccacc
agtgccaacatctacttggccatgaccacgatcgggatggccttggcatacgagaagcgc
ggtgacaccgaaaaggcgctccagtttgtcgggcgggcaatccacctgatcgatgacaag
cagcttaacggtggtaagcggcaatggatcatcttgtaccacgagatttccggcctgtac
tatcgtttaggccagtaccggcgggcaatttcaatggctggacggggaattaagatctgc
cgggaagagcaaacactcttcttattgggtggtctttacatgacccgtggccaggcgcaa
gctaagttaggccagggcgacgtggcccaggaaagcttaaccgtcgccctttcaatctac
aagatcatggaagacgacaccgcacaagagacgctctcacaagaattgagtcaattagtt
gaataa
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