Limnospira fusiformis: HFV01_01745
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Entry
HFV01_01745 CDS
T06534
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
lfs
Limnospira fusiformis
Pathway
lfs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HFV01_01745 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfs03400
]
HFV01_01745 (uvrC)
DNA repair and recombination proteins [BR:
lfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HFV01_01745 (uvrC)
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_2
HHH_5
HHH
HHH_3
GIY_YIG_2
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QJB24747
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Position
333604..335478
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AA seq
624 aa
AA seq
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MTIIPLIEDSDRLEMRLKEIPPVPGVYFMKDGNENILYIGKSKKLRSRVRSYFRDRQKHS
HRINLMIQQVTDIEFIVTDTEAEALALEANLIKNHQPHFNVLLKDDKKYPYLCITWSEPY
PRIFITRKRNLSNPKDRYYGPYVDTGLLRSNLQLVKRLFPLRQRPKPLFKDRPCLNYDIG
RCPGVCQQMISPEDYHQIVQKVAMVFQGRTEELIKNLTAQMQQAAAELNFETAAKFRDRI
QGLQSLNQDQKVSLPDETVSLDAIALATDGQQASVQLFQIRAGHLVGRLGFLAKVYPSET
ALTSLELGGIIQRVLQEHYQTVDAVEIPSEIVLQYSLQDGELVADWLSDRKGRKVTLITP
QRQAKLDLIAMVERNANYELMRLQKLSDRHHQSLQDLTEILDLPDLPHRIEGYDISHIQG
SDAVASRVVFIDGLPAKQHYRQYKIKNPDVHSGRSDDFASLAEVIGRRFRDYQNLEPQDK
PDLIMIDGGKGQLSAVVKVLQGLDILEELKVISLAKRREEIFVPGESQPLTTHPEQPGVQ
LLRRLRDEAHRFAVSFHRNQRSKRMKRSHLDDIPGLGHHRQKLLLGHFRSIDYIRMATPT
QLAEVPGIGEKLARQIYDYFHPST
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgacaattataccactaattgaagatagcgatcgcctagaaatgagattaaaagaaatt
cccccggttccgggtgtgtatttcatgaaagatggtaatgagaatattctgtatattggg
aaatcgaaaaaattgcgatcgcgggtgcgttcctattttcgcgatcgccagaaacatagt
caccggattaacttaatgattcaacaggtgacagatattgaatttatcgttactgatacc
gaagccgaagccttggctttagaagctaatttgattaaaaaccatcaacctcattttaat
gtcttactcaaggatgataaaaaatatccctatctgtgtattacttggtcggaaccatac
ccgcgcatttttattacccgaaaacgtaatttaagcaatcccaaagatagatattatggc
ccttatgtagataccggactattgcgaagtaatctacaattggttaagcgtctatttccc
ctgcgtcaacgtcctaaacctttgtttaaagaccgtccctgtttaaattatgatataggt
cgctgtccgggagtttgtcagcagatgatctccccagaagattatcatcaaattgtccaa
aaagtggcgatggtttttcaaggacgcacagaagaacttatcaaaaatttaaccgcgcaa
atgcaacaagccgccgctgagttaaactttgaaaccgccgccaaattccgcgatcgcatt
caaggtttacagtctctcaaccaagaccaaaaagtttcccttcctgatgaaacggtgtct
cttgatgcgatcgctttggctactgacggacaacaagcctccgtgcaacttttccaaatc
cgcgccggacatttggtcggtagattaggctttttggcgaaagtttaccctagtgaaaca
gccttgacttccctagagttggggggaattattcagcgggttttacaggaacattatcaa
accgttgatgctgtggaaattcccagcgaaattgtgctacaatatagtttacaagatggg
gagttagtagcagattggttaagcgatcgcaaaggtcggaaagttaccttaattactccc
caaagacaagccaaactcgatttaatcgcaatggtcgaacgcaacgctaactatgagtta
atgcgactgcaaaaattaagcgatcgtcatcatcaatctctccaagacttaaccgaaatt
ctcgaccttcccgaccttccccaccgcatagaaggttatgatatctcccatattcagggt
tctgatgcagtcgcctcccgcgtggtatttattgatggtttacccgccaaacaacactac
cgacagtataaaattaaaaatcctgatgtgcattcgggaaggtctgatgatttcgccagt
ttagcagaagtaattggtcgccgttttcgagattatcagaatttagaaccccaggataag
ccagatttgattatgattgatggtgggaaaggtcaactctcagccgtcgtgaaagttttg
caaggtctggatattttagaagagttgaaggtgattagtttagccaaacgccgagaggaa
atttttgtccctggtgagtctcaaccattaactacccatcctgaacaacctggggtacaa
ttattgcgacgactacgagatgaagcccatcgatttgcggttagtttccatcgtaaccaa
cgcagtaaacgcatgaagcgatcgcatttagatgacattcccggactcggacaccaccgc
caaaaattgctattaggtcactttcggtctattgattatattcgcatggcaacccccaca
caactggcggaagttcccggaattggcgaaaaactagcccgacaaatttatgattatttc
catccttctacctga
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