Lactobacillus gasseri ATCC 33323: LGAS_1448
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Entry
LGAS_1448 CDS
T00410
Name
(GenBank) Predicted HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lga
Lactobacillus gasseri ATCC 33323
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lga03019
]
LGAS_1448
Messenger RNA biogenesis [BR:
lga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LGAS_1448
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF1381
Motif
Other DBs
NCBI-ProteinID:
ABJ60807
UniProt:
A0A805ZYU1
LinkDB
All DBs
Position
complement(1434657..1435634)
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AA seq
325 aa
AA seq
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MIKRLLDYNDGEDMDLVLLLKDSSLRTSKNGKQYLVLQFSDSSGTIRGNLWNASQQDADT
FSPGTIVELSGKREEYQDRPQIRIYDLRVVGPNEGYDLNQFVHSAPIKQKDLEEEINKRV
FEILNPTWNRIVRYLLKKWNKQFFSYPAGKSNHHAVRNGLAFHTVSMLRDAEGIANTYPQ
INRSLLYAGCILHDMGKVIELSGPVATKYTTEGNLIGHLVLIDEQIMLAAHELKIDEHSE
DLMLLRHLVLSHHGLPEYGAAHRPVVLEAEVLHKIDDLDATVYAITNALQQTKPGEFTET
IKSQDNRRFYRPKNDEALDQAPKLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaggttgcttgattataatgatggcgaagatatggatttggttttactgtta
aaagattcaagtcttcgcaccagtaaaaatggtaaacaatacttagttttacaatttagc
gattcaagtggcacaattaggggaaatctttggaatgctagtcagcaagatgctgatacc
ttcagtccaggcactattgttgaattaagcggaaaacgagaagagtatcaagatcgacca
cagataaggatttatgacttaagagtagtaggaccaaatgaaggttatgacttaaaccaa
tttgttcactctgctccaattaagcaaaaagatctcgaagaagaaattaataaacgtgtt
tttgaaattttgaatccaacttggaatcgaattgtacggtatttgcttaaaaagtggaat
aagcagttcttttcatatccagccggtaagtctaaccatcatgctgtcagaaatggttta
gcatttcatactgtttccatgttaagggatgctgaagggattgctaatacttatccacag
attaatcgctcgctcctttatgctggatgtattttgcatgatatgggaaaggtaattgaa
ttatctggtcctgttgctactaaatatactactgaaggaaatctaattggtcacttagtt
ttaattgatgaacaaattatgttagcagcacatgaactaaagattgatgaacatagtgaa
gacttaatgcttttgagacatttagttttatctcatcatggattgccggaatacggagca
gctcatagaccagtagttttagaagctgaagttttgcataagatcgatgatttggatgca
acagtttatgcaattactaatgctctgcagcaaactaagccaggtgaatttactgaaaca
attaagtcgcaagataatcgcagattttatcgtcctaaaaatgacgaagctttagatcaa
gcaccaaaactagaataa
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