Lottia gigantea (owl limpet): LOTGIDRAFT_127166
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Entry
LOTGIDRAFT_127166 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_127166
Enzymes [BR:
lgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOTGIDRAFT_127166
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LOTGIDRAFT_127166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
20232680
NCBI-ProteinID:
XP_009061418
JGI:
127166
UniProt:
V3ZA05
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
FDESDDDYDDEVSNTRDLVRSQNRKKKKSGGFQSMGLSTNTFKGIQHKGYKIPTPIQRKT
IPIIMNGKDVVAMARTGSGKTAAFLIPLFEQLKIHSSNGARAMIMSPTRELALQTLKFTK
EIGKHTDLRAAVILGGDRMEYQFSALHENPDIIIATPGRFLHVTMEMNLKLKSMEYVVFD
EADRLFEMGFQEQLHEIIHRLPESRQTLLFSATLPKQLVEFAKAGLNDPTLIRLDVDNKL
SEHLQTVYISCRSDDKPALLINLLQNIIPTKEQCFIFAATKHHVEYLQLILEKAGISCSY
IYSSLDPTARKIAVGKFQMKKVRVMIVTDLAARGIDIPMLDNVINYNFPAKSKLFVHRVG
RVARAGRTGTAFSIISPDEVQFLVDLHVFLGRPLKLVTGNQQHDDEDGLYGTYPRNFLDS
DILMLRQWHSESLDLNEMKRVCGNAYKQYLRSRPNPAPESVKRVKQMESDGIILGVHPCY
KSKTDSDDAEQQKLLNALKSYKSRSTVFEMNITGKCKSHDIMKEKRAKHQAVISTTTQKT
TQNKLDRELVNTRSGSNKQDSQANAEESVFSTVIDGKPSSKYDMNRKKKKRDRIGRDEEN
YLSYQPADYQSEKGLSLGGFEREVAGAEIEIVGDDIDTIRNQRVQSKWDRKRKRFVKDGG
GDPNKKKIRTESGAWIPASYKSSVYPFQIWSKNMVLMTLILKFHASLFSQILILIYL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
tttgatgaaagtgatgatgattatgatgatgaggtatcaaatacaagagatttagttaga
agtcaaaatagaaagaaaaagaaatctggaggttttcagtctatgggattatcaactaat
acttttaaaggtattcaacataaaggctataaaataccaacaccaattcaaagaaagacc
atacctattattatgaatggtaaagatgtagtagcaatggctagaacaggtagtggaaaa
actgcagctttcttgattccactgtttgagcagttaaagattcactcatcaaatggagct
agagctatgattatgtcacctactagagagttagctttacaaacattaaagtttactaaa
gagattggaaaacacactgatcttagagcagcagtcatattgggtggtgatagaatggaa
tatcagttttcagctcttcatgaaaatcctgatataataatcgccacaccaggaagattt
ctacatgttaccatggagatgaatttaaaattaaaatcaatggaatatgtagtatttgat
gaggctgacagattatttgaaatgggatttcaagaacagttacatgaaattatacataga
ttacctgaatcacgtcaaactttattattctctgctaccttacctaaacaattagtagag
tttgctaaagctggtttaaatgatcccacattgatacgcttagatgttgataataaactc
agtgaacatttacaaactgtatatatatcatgtagatcagatgataaacctgcattatta
attaatctattacaaaatattataccaactaaagaacagtgttttatatttgctgctacc
aaacatcatgtagaatatcttcagttgattttagagaaagctggtattagttgtagttat
atctatagttcattagatccgacagctagaaagatagcagttggcaagtttcagatgaag
aaagtaagagttatgatagtaactgatctagcagctcgtggaattgatataccaatgtta
gacaacgttattaattataactttcctgccaaatctaaattatttgtacacagagttggt
cgtgtagctagggcaggaagaactggtacagcattctccattatttctcctgatgaagta
caatttttagttgatttacatgtttttcttggtcggccattaaaactagtcacaggcaat
caacaacatgatgatgaagatggtttatatggtacttatcccagaaattttctagattct
gatattttgatgttacgacagtggcattcagaatctttggacttgaatgaaatgaagaga
gtatgtggtaatgcttacaaacaatatctacgttctagacctaacccagcaccagaatct
gttaaaagagtgaaacagatggagagtgatggtattatactaggagttcatccttgttac
aaatctaaaacagattcagatgatgctgagcaacagaaattattaaatgctttaaaatct
tataagagcagatcaactgtatttgaaatgaatataactgggaaatgtaaaagtcatgat
attatgaaagaaaagagagctaaacatcaagctgttatatcaacaactacacagaaaaca
actcaaaataaactagacagagagttagttaatactagatctggtagtaataaacaggac
agtcaggctaatgctgaagaatcagtatttagtacagttattgatggtaaaccatcatct
aaatatgatatgaatagaaagaagaagaaaagagatagaataggaagagatgaagaaaac
tatttatcttatcaacctgctgattaccagtcggagaaaggattaagtttgggaggattt
gagcgggaagtagcaggagcagaaattgaaatagttggtgatgatatagatactattaga
aatcaacgtgtacaatctaagtgggatagaaagagaaaaagatttgttaaagatggtggt
ggtgatccaaataaaaagaaaatacggactgaaagtggagcctggattcccgcttcttat
aaatctagtgtatatccttttcaaatttggtcaaaaaatatggttttgatgacattaata
ttaaagtttcatgcatctctatttagtcagattttaattttgatatacttataa
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