Lottia gigantea (owl limpet): LOTGIDRAFT_140434
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Entry
LOTGIDRAFT_140434 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K08874
transformation/transcription domain-associated protein
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LOTGIDRAFT_140434
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lgi01001
]
LOTGIDRAFT_140434
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_140434
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_140434
Protein kinases [BR:
lgi01001
]
Serine/threonine kinases: Other
PIKK family [OT]
LOTGIDRAFT_140434
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
LOTGIDRAFT_140434
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
LOTGIDRAFT_140434
STAGA complex
LOTGIDRAFT_140434
TFTC complex
LOTGIDRAFT_140434
TIP60 complex
LOTGIDRAFT_140434
SAGA complex
LOTGIDRAFT_140434
SLIK complex
LOTGIDRAFT_140434
NuA4 complex
LOTGIDRAFT_140434
Chromatin remodeling factors
ASTRA complex
LOTGIDRAFT_140434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tra1_central
Tra1_ring
AP5B1_N
ACDC
Motif
Other DBs
NCBI-GeneID:
20234316
NCBI-ProteinID:
XP_009048461
JGI:
140434
UniProt:
V4AU80
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
EKKLKAAQELSENFETVVSSQQYPQFLAEAIQVFVRILKDGEPLFIAEQPMQQLRKLLLE
IIHRIPCNDHLKKFVQTILSLMFKLLKEEKPDSKSIIQYRSMSSIWLKNDFIFFRFKILC
TTTKVKDVSEINIDIWLQEIYTTTNVQTDKKNADNAAISVGTSYTYNIIPRGMQSLKVLA
ELPIIVVLMYQLYKTNVHPDMAEFIPLVMNTITLQPLPAQRSSLAFNKEIFVDFIAAQIK
TLSFLAYIIKFFQNQVNNHAQQMVQGLLGLLSLCPPEVAHHRKELLIAAKHILSTDLRNK
FVPCIDKLFDETILIGTGWTTYDSLRPLAYSTLADLVHHVRTALPLSDLSLAVNLFSKNV
HDESLPSSIQTMSCKLLLNLVECIRQKSEQEKGDGRQLLMRMLEVFVLKFKTIAKTQLPL
ILQKCKPQQPATTESKTLDGVKSPVDVKPFVNTDNKEEKVFCPSLISSEVKDKEEKYNVY
TVADCRSLVKTLVCGVKTITWGVLSCKAIGTGSLVQNKMFLSKETLVYVRLVKYALKALD
IYTINVTSAGQAYIRPAAVQTVRTKEEKEVLEHFAGVILDKFEFDDLSMSVFELLPLIYE
KRVKIFIAHDLVKTHHNLLAIEVTVYVRILLNNVFLDLSDYIRILLCYLWIITKFFGFIR
LYKDPPHLHTIVNQSMDLAMSAKEPYNYFLLLRALFRSIGGGSHDLLYQEFLPLLPNLLQ
GLNSLQSGLHRQHMKDLFVELCLTVPVRLSSLLPYLPMLMDPLVSALNGSQTLVSQGLRT
LELCVDNLQPDFLYDHIQPVRAELMQALWKTLRNPTDTIAHVAFRVLGKFGGGNRKMLRE
PQMLSYNDKETVGPCVTVYFQDSKAPLSLPVEKVGYIYN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
gaaaagaaattgaaagcagcacaggaattgagtgaaaactttgagacagtagtatcatca
caacaatatccacagttcctagctgaagctattcaagtttttgtaagaatattaaaagat
ggagagccgttgtttattgctgaacaacccatgcagcaattacgaaagttattacttgaa
attattcatcgtataccatgtaatgatcatttgaagaagtttgttcaaacaattctatct
ttaatgtttaaattactcaaggaggaaaaacctgattcaaaatctataattcaatacaga
tcaatgtctagtatctggcttaaaaatgactttatatttttcagattcaagattttatgc
actacaactaaagtcaaagacgtctcagaaattaacattgatatttggttacaagagatc
tatacaacaaccaatgtgcaaacagataaaaagaatgcagacaatgcagctatatcggta
ggaactagttatacatacaatattataccaagagggatgcaatctctaaaagttctagct
gagttaccaatcattgttgtattgatgtatcaactatacaaaaccaatgttcatccagat
atggctgaatttatacctttggtcatgaataccattactttacaaccattacctgctcaa
agatcaagtctagcttttaataaagaaatatttgtggattttatagcagctcagataaaa
accctgtcatttctggcctacatcatcaaattttttcagaatcaagttaacaatcatgca
caacaaatggtacaaggtctgttaggtttactatcattgtgtccacctgaggtagcacac
catagaaaggaactactgatagcagctaaacatattttatctactgatcttagaaacaaa
ttcgtaccctgtattgataagttatttgatgaaactatattaattggtactggatggaca
acatacgattcattacgaccactagcatacagtacactagctgatttagttcaccatgtt
cgtacagcattaccattaagtgatctatcactagctgttaatttattctctaagaatgta
catgatgaatcactacctagcagtatacagactatgtcctgtaaactgttactaaaccta
gtagaatgtattcgacagaaaagtgaacaagaaaagggagatggaagacagttgttaatg
agaatgttagaagtattcgtattaaaatttaaaactattgctaaaactcaactcccatta
atattacaaaaatgtaaaccacagcaaccggctacaacagagagtaaaacattagatgga
gtgaagagcccagttgatgtcaaaccgtttgtgaatacagataataaagaagagaaagtc
ttctgtccgtcactgatatcttcagaagtcaaagataaagaggaaaagtataatgtctat
actgtggctgattgtagaagtttggtaaaaacattagtttgtggagttaaaactataact
tggggtgttctgtcttgtaaagctataggcacaggtagcctagttcagaacaagatgttt
ttatctaaagaaacattagtatatgtaagattagtgaaatatgctttaaaggctctagat
atatatactattaatgtaacttcggcaggtcaagcctatatcagaccagcagcggtacaa
acagttcgaactaaagaggaaaaggaagttttagaacattttgctggagttatcttagac
aagttcgaatttgatgatctttcgatgagtgtttttgagttattgcccttgatttatgaa
aaacgcgtcaaaatttttattgcccatgacttggtaaaaacgcatcataatttgttggcg
atagaggtgacagtttatgtcagaattttattaaataatgtttttttggatttatcggat
tatataaggatcctgttatgttatttatggataattactaagttttttggatttatcaga
ttatataaggatcctcctcatcttcatactatagttaatcaatccatggatctagctatg
agtgctaaagaaccctataattatttcttgttgctaagggctttatttcgctctattggt
ggaggcagccatgatctactgtatcaagaatttctacctctcttgcccaatctgttacaa
ggtctgaacagtttacagagtggtttacatagacaacatatgaaggatctgtttgtggaa
ttatgtttgacagtaccagttagactgagttctctattaccgtatttacccatgttgatg
gacccacttgtctcagctttgaacggttcacaaaccttagtcagtcaggggttacgaaca
ttagaactatgtgttgataatcttcaaccagattttctctatgatcacatacaacctgta
cgagctgaattgatgcaggctttatggaaaaccttacgcaaccccacagacactatagcc
catgtagcttttagagtcttgggcaaatttggaggaggaaacagaaaaatgctacgagaa
ccacaaatgctaagctacaatgataaagaaacagtgggaccttgtgtaacagtctatttt
caagattctaaagcaccattatcattaccagtagagaaggtaggctatatatataattga
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integrated database retrieval system