KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_194209
Entry
LOTGIDRAFT_194209 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K19719  collagen type II alpha
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    LOTGIDRAFT_194209
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:lgi00536]
    LOTGIDRAFT_194209
Glycosaminoglycan binding proteins [BR:lgi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   LOTGIDRAFT_194209
SSDB
Motif
Pfam: Collagen COLFI RPOL_N
Other DBs
NCBI-GeneID: 20245069
NCBI-ProteinID: XP_009061652
JGI: 194209
UniProt: V4BFM7
LinkDB
Position
Unknown
AA seq 853 aa
MGAEGRQGDPGRPGAQGPRGERGPSGEPGPGGPPGPTGQTGERGEGGQQGEQGFQGLPGA
DGAPGETGNTGPPGETGAPGESGLAGERGEQGFPGEVGPPGQRGAPGERGNSGPSGEVGM
PGPPGNSGDRGDPGPQGLIGLPGEQGPQGRAGPRGLTGSTGERGRDGEPGPPGETGNAGP
PGATGPSGLVAAKGDRGPSGPAGEPGPPGNTGQRGVAGAQGQQGPPGLGGAPGESGLAGE
TGAPGLKGDNGARGFRGEQGPSGEPGPEGVAGRKGSRGEGGTPGTAGQPGQPGRQGPAGP
PGAQGSLGPAGTAGQQGERGERGEVGPPGRQGEAGASGNNGLDGAPGDRGSPGQQGPSGP
PGPTGPQGERGNPGAPGFQGEPGPQGLAGAPGESGQAGRDGSDGQSGPPGPLGPPGSPGP
PGEPGLPGSSGKDGLPGLPGIVGSKGSRGLQGRSGPPGLQGNSGPPGTTGAQGSQGERGE
RGERGPSGQPGSTGAPGIAGAQGLQGEKGETGRSGAAGDKGWPGLPGPQGPPGPSGSSGE
TGPSGQQGPPGQPGQPGQRGLNGRPGEPGAQGQVGPAGGRGSQGDDGPSGPMGPRGAPGP
PGPPGYAPVFPPRQQQSKGVDPYYQYDQPEEDFLKLPNFNERVSLVQEALHRVRKPTGSK
LDPAITCRQLFEDNPEFEDGIYNIDPNMGSGIDSFEVFCRKQEGETCIKSAAAIYKPQRW
TQHDDGGYLFMEELNDDKEFEYAVKETQLNALKDHSEKGRQSLTYNCLNSEAYGLRFAMD
NDVEIDSTQTRIGKAATINYRDECNSTDNEWHSAVFELRTKKAKMLPILDVRLFDVGRDN
QQFGIEVGEVCFS
NT seq 2562 nt   +upstreamnt  +downstreamnt
atgggagctgaaggacgacaaggtgatcctggacgaccaggtgcacaaggaccacgagga
gagagaggaccttctggtgaacctggtccaggcggacctcccggacccactggtcaaact
ggagaacgaggagagggtggacaacaaggagaacaaggtttccaaggtttacctggtgct
gatggagctcccggagagaccggtaacactggaccacccggagaaactggtgcccctggt
gaatctggacttgctggtgaacgaggtgaacaaggtttccctggtgaagttggaccacct
ggacaacgaggtgcccctggagaacgaggtaactctggaccttctggagaagtcggtatg
cccggtccacctggtaattctggagatcgtggtgatcctggtccacaaggattaattggt
cttcctggagagcaaggtccacaaggtcgtgctggtccaagaggtcttactggttctact
ggagaaagaggtcgagatggtgaacctggtccacccggagagactggtaatgctggtcca
cccggagcaactggtccatctggactcgtagctgctaaaggagatcgtggaccttccggt
cctgctggagaacccggtccacccggaaacactggacaacgaggtgttgctggtgcccaa
ggtcaacaaggtccacccggtcttggcggtgcccccggagaatctggtcttgctggtgaa
actggagctcctggattaaagggagataatggtgctcgtggattccgtggtgaacaaggt
ccctctggtgaacctggacccgaaggtgttgctggacgtaaaggttctcgaggagagggt
ggtacccccggtaccgctggacaacctggtcaacccggccgacaaggacccgctggacca
cccggagcccaaggatcacttggacctgccggtacagctggacaacaaggagaacgagga
gagcgaggtgaggttggacccccaggacgacaaggagaggctggtgcttctggaaacaat
ggacttgatggtgcccccggtgatagaggatctccaggacaacaaggaccatctggacct
cccggaccaactggaccacaaggtgaacgaggaaaccctggtgcccctggattccaagga
gaacctggacctcaaggtcttgctggagcacctggtgagtctggacaagctggacgagat
ggtagtgatggacaatctggaccacccggacctcttggtccacctggatctcctggacca
cctggagagcccggattacctggatcttctggtaaagatggtcttcctggattacctggt
attgttggttctaagggctcacgaggtcttcaaggacgatctggaccacccggactacaa
ggaaattccggtccaccaggaacaactggagcacaaggatctcaaggagaacgaggagag
cgaggcgaacgtggaccttctggacaacctggtagtactggtgctcctggtattgctgga
gctcaaggtcttcaaggagagaagggagaaaccggacgttctggagctgctggagacaaa
ggatggccaggattacctggtccacaaggacctcccggaccatctggaagcagtggtgaa
actggaccttctggtcaacaaggtcctcctggacaacctggacaacctggtcaacgtggt
ttgaatggacgacctggagagccaggagcccaaggtcaagttggaccagctggaggcaga
ggatctcaaggtgatgatggaccatctggaccaatgggaccacgaggtgcccctggacca
ccaggaccccccggatatgccccagtcttcccaccacgacaacaacagagcaagggagtc
gatccttactatcaatatgatcaaccagaagaagacttccttaaattaccaaacttcaac
gagagagtttcccttgttcaagaagcactccaccgagtacgtaaaccaactggcagcaaa
ttggaccctgcaattacttgccgtcaattattcgaagataacccagaatttgaagatggt
atttacaacatcgatcctaatatgggaagtggtattgattcatttgaagttttctgcaga
aagcaagaaggcgaaacctgtatcaaatctgctgccgccatctacaaaccacaaagatgg
actcaacatgatgatggtggatacttgtttatggaagaacttaatgacgacaaagaattc
gaatatgctgttaaagaaactcagcttaacgctttgaaggatcattcagaaaagggtcgt
caatcattaacatacaactgtttgaactctgaagcctatggattaagattcgccatggac
aatgatgttgaaatcgattccacccagactcgtataggaaaagctgcaactattaactat
agagatgaatgcaatagcacagataatgaatggcattctgccgtttttgaacttagaacc
aaaaaagctaaaatgttaccaatattagacgttaggttatttgacgtcggtcgtgataac
caacagtttggaattgaggtgggagaagtttgcttcagctaa

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