Latilactobacillus graminis: LG542_02905
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Entry
LG542_02905 CDS
T06857
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lgm
Latilactobacillus graminis
Pathway
lgm03030
DNA replication
lgm03410
Base excision repair
lgm03420
Nucleotide excision repair
lgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG542_02905 (polA)
03410 Base excision repair
LG542_02905 (polA)
03420 Nucleotide excision repair
LG542_02905 (polA)
03440 Homologous recombination
LG542_02905 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgm03032
]
LG542_02905 (polA)
03400 DNA repair and recombination proteins [BR:
lgm03400
]
LG542_02905 (polA)
Enzymes [BR:
lgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG542_02905 (polA)
DNA replication proteins [BR:
lgm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LG542_02905 (polA)
DNA repair and recombination proteins [BR:
lgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LG542_02905 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LG542_02905 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
XPG_N
Motif
Other DBs
NCBI-ProteinID:
QFP79235
UniProt:
A0A5J6Z4D0
LinkDB
All DBs
Position
585780..588440
Genome browser
AA seq
886 aa
AA seq
DB search
MSSQKKLLLVDGNSVAFRAFFAMHQALDHFTNQAGLHTNAIYAFKNMLDIILKKIEPTHV
LVAFDAGKTTFRTEQFADYKGGRSKTPPELTEQFPYIRKLLAAYGIQSYDLANYEADDII
GTLARQAELSGFTVDIVTGDRDLTQLTTDLTTVNITVKGVNEIEAYTPAHVREKLGLNPS
QIIDLKGLMGDTSDNYPGVNKVGEKTALKLITAYDNLEGVYAHIDEMKKSKLKEHLIEDR
ELAFMSKNLATIECDAPITLGLDELAFHGPDQTALVAFYQEMGFKSFLNQLDDVPVESVA
SENYQFTVLTFENIAEVVATTENVAFGIEMLSDNYHTADLIGFYIGRPDHWYVSDDVTLL
AEPVLKNWLEDDKCPKAVFDVKRNQVAANRLGIRLSGVQFDLLLASYLLNTTNNSNDLGT
IAALHQYQNVQTDEAVYGKGAKRARPTELTILYQHLIQKAAAIYQLEPQLTAQLKAHQQF
DLFTSMELPLALVLADMEITGVRVDASRLQQMGGEFSQTLKILEEKIYAEAGEIFNINSP
KQLGVILFEKMGLPVIKKTKTGYSTAVDVLEQLKKTAPIVQTILDYRQIAKIQSTYVEGL
LKSIHQDNKIHTRYLQTLTQTGRLSSVDPNLQNIPVRLAEGRKIRQAFVPSHPDWQMFAS
DYSQIELRVLAHISGDQNMQAAFKENRDIHANTAMKIFGLSSADEVTPNMRRQAKATNFG
IVYGISDYGLSQNIGITRAEAKRFIDAYFEQYPGVHQFMQDIVQKAREEGYVETLFHRRR
YLPDIHAKNFNLRSFAERTAMNTPIQGSAADIIKMAMILMQAALKKANLQAKMLLQVHDE
LIFEAPMSEIPILEKLVPNVMDSAVQLMVPLKVESGFGPTWYDIKK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaaaaaaaattattattagttgatggtaatagcgttgcttttcgggctttt
tttgcgatgcatcaggctttggaccactttactaatcaggctggactgcatactaatgca
atctatgcgtttaagaacatgttagatattattttgaaaaagatcgaacctacgcatgtg
ttagttgcttttgatgcgggtaaaacgacttttagaacagaacaatttgccgactataaa
gggggacggtcaaaaacgccacctgaattaacagagcaatttccgtatattagaaagtta
cttgctgcctatggaattcagtcttacgatcttgccaattatgaagctgacgatattatt
gggacccttgctcgacaagccgagttgtccggatttacagtcgatatcgttaccggcgat
cgtgatttaacccagttgacaaccgatctgacaactgtcaacatcacggttaaaggtgtc
aatgaaatcgaggcctatacgccagcccacgttcgcgaaaaattaggcttaaaccccagc
caaattattgatttaaaagggttaatgggggatacttcggataattatccaggcgtcaat
aaagttggtgaaaaaaccgcattaaaattaattaccgcctatgacaaccttgaaggggtc
tatgcacatattgacgagatgaaaaaaagcaagttaaaggagcacttgattgaagatcgt
gaattggcctttatgagcaagaacttggcaactatcgaatgtgatgcgccgattacatta
ggcttagatgaacttgcatttcatggaccagatcaaactgctttggttgctttttatcaa
gaaatgggttttaaatcgtttttgaaccaacttgatgatgtcccagttgaatcggttgca
tctgaaaattatcagtttactgtattaacatttgaaaatattgctgaggttgtagcgact
acagaaaatgtcgcttttggtattgaaatgttatcggataattatcacaccgcagattta
attggtttttatattggtcggccagatcactggtatgtcagcgatgatgtcacgctttta
gctgaaccggttttaaaaaattggctagaagatgacaagtgtcccaaagcggtgtttgat
gtgaaacgaaatcaagtagcggccaatcgcttaggaattcgattatcaggagttcaattt
gacttactactagcatcttatttattgaacacgaccaataatagtaatgatctggggacg
attgctgccttgcaccaatatcaaaatgtgcaaactgacgaggccgtttatggtaagggc
gctaaacgggcacgcccaactgaactaactattctctatcaacatttgattcaaaaagca
gccgctatttaccaattagaaccgcaattaacggcacagttaaaagcgcatcagcagttc
gatctatttaccagtatggaattgcctttagcacttgtcttggctgatatggaaatcacg
ggcgttcgggttgatgcaagtcgtctacagcaaatgggtggcgagttcagtcaaacactc
aaaattttggaagaaaaaatttatgccgaagctggtgagatctttaatatcaattcacct
aagcaattaggtgttatcttattcgagaaaatgggtttacctgttatcaagaaaactaaa
acgggttattcgactgcggttgatgtcttagaacagctgaaaaaaacagcgccaattgtc
caaactatcttagattatcgtcaaatcgctaagattcaatcaacctacgttgaaggattg
ttgaagtcgattcatcaagataataaaattcatacgcgatatctacaaaccttaacgcaa
actggacgactatcatcagttgatcctaatttacaaaatattccggtgcgattggcggaa
ggccgcaagattcggcaagcttttgtacctagtcatcctgactggcagatgtttgcttct
gactattcgcaaatcgagttacgagttttagcccatatttcaggtgatcagaatatgcaa
gcagccttcaaggagaaccgtgatattcatgcgaataccgcaatgaaaatttttggccta
tctagtgctgacgaagtgacgccaaatatgcgtcgtcaagctaaagcaaccaattttgga
attgtttatggaattagtgattatggtttatcccaaaatattgggattactagggctgag
gctaaacgttttattgatgcttattttgaacaatatccaggagtccatcaatttatgcaa
gacatcgtgcaaaaggcccgcgaagaaggatatgtcgagacgctctttcatcgccgtcgt
tatttaccagatattcatgcaaaaaacttcaatctgcgttcatttgcggaacggacagcg
atgaatacgcctattcaagggagtgctgcggacatcatcaaaatggcgatgattttgatg
caagcggcgttgaagaaggctaatttacaagctaagatgctcttacaagttcacgatgaa
ttgatttttgaagcaccgatgtcagaaataccaattttagaaaaattagtgcccaatgta
atggattctgcagtccaattaatggtaccgttaaaagtagaaagtggcttcggaccaact
tggtacgatattaagaagtaa
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