Lactococcus garvieae ATCC 49156: LCGT_0315
Help
Entry
LCGT_0315 CDS
T01618
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lgr
Lactococcus garvieae ATCC 49156
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgr03016
]
LCGT_0315
Enzymes [BR:
lgr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LCGT_0315
Transfer RNA biogenesis [BR:
lgr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LCGT_0315
Prokaryotic type
LCGT_0315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
NAGLU
Motif
Other DBs
NCBI-ProteinID:
BAK57828
LinkDB
All DBs
Position
322758..323504
Genome browser
AA seq
248 aa
AA seq
DB search
MTRYMATIAYDGTNFAGFQTQNNQRTVQEEIEKVLTKLNSYQTVILHGSGRTDSGVHAHA
QRIHFDLQGQRDEERLRFALDTQTPSDIAFHEVIQVEEDFHVRFNKHEKIYEYFLENSKV
RSPFYRMYRAHFRYKLDEDLMRQALADLVGTHDFTGFTASGATVEDKVRTITQAELVTLD
DENYKFIFRGNGFLYKQVRNMMGTVIKIGNGRMPVSQIKKILESKNRDLAGPTAAPEGLY
LKEVIYLD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgactagatatatggcaacgattgcttatgatggcacaaattttgcaggttttcaaacc
caaaataatcaacggacggtgcaagaagagattgaaaaagttttgacaaaattaaattct
taccagaccgtgattttgcatggctcaggacgtacggattcgggggttcatgcgcatgct
caacgtattcatttcgacttgcaagggcagcgagatgaggaacgtttacgctttgctttg
gacacgcaaaccccatcagatattgccttccacgaagtcatacaagttgaagaggatttt
catgtccgctttaacaagcatgaaaaaatttatgagtattttttagaaaatagtaaagtt
cggagtcctttttaccgcatgtatcgtgcacattttcgttataaacttgatgaggatctg
atgcgacaagctctagcggatttggttggaacgcatgattttactggttttacagcatct
ggtgctacagttgaagataaggtgcgaacgattactcaagctgagctcgtgacacttgat
gatgaaaattataaatttatttttcgtggaaacggttttctttataaacaagtccgtaat
atgatggggactgtgatcaaaataggaaatggccggatgcctgtttcacaaattaaaaag
attttagaaagtaaaaatcgtgacctagcaggtccgactgctgccccagaagggctctat
ctcaaggaggtaatttatcttgactaa
DBGET
integrated database retrieval system
