Lysobacter gummosus: LG3211_5004
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Entry
LG3211_5004 CDS
T04163
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LG3211_5004 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_5004 (ung)
Enzymes [BR:
lgu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LG3211_5004 (ung)
DNA repair and recombination proteins [BR:
lgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LG3211_5004 (ung)
Prokaryotic type
LG3211_5004 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALN93937
LinkDB
All DBs
Position
complement(5642476..5643180)
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AA seq
234 aa
AA seq
DB search
MSDGDRDIKLEPSWKQHVGDWFGREDMLALSRFLRERKAAGARIFPPGPQIFSAFDATPF
DQVKVVILGQDPYHGAGQAHGLCFSVQPGVPVPPSLDNIFKEIHRDLGIARPDHGYLMPW
AHRGVLLLNAVLTVEEGRAGAHQGKGWEGFTDHVVDVLNREREGLVFLLWGSYAQAKGKV
IDAGRHRVLKAPHPSPLSAHRGFIGCGHFSAANDYLSRRGEAPIDWTLPPRSEL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggcgaccgcgacatcaagctggagccgtcgtggaagcagcacgtcggcgac
tggttcgggcgcgaggacatgcttgcgctgtcgcgcttcctgcgcgagcgcaaagccgcc
ggggcgcggattttcccgccggggccgcagatcttttccgctttcgacgccacgccgttc
gatcaggtgaaggtcgtgatcctgggtcaggacccgtaccacggcgccggccaggcccac
ggtctgtgcttttcggtgcaacccggcgtgccggtgccgccgtcgctggacaatatcttc
aaggagatccatcgcgatctcggcatcgcccggcccgatcacggttatctgatgccgtgg
gcgcatcgcggcgtgctgctgctcaacgccgtgctcaccgtcgaggaaggccgcgccggc
gcgcatcagggcaagggctgggaagggttcaccgaccacgtcgtggacgtgctcaaccgc
gagcgcgaaggcctggtgttcctgctgtggggcagctacgcccaggccaagggcaaggtc
atcgacgccggccgtcatcgcgtgctcaaggctccgcacccctcgccgctgtcggcgcat
cgcggctttatcggctgcgggcatttctccgccgcgaacgactacctctcgcgccgcggc
gaggcgccgatcgactggaccttgccgccgcgcagcgaactgtaa
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