Laribacter hongkongensis: LHK_02836
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Entry
LHK_02836 CDS
T00884
Symbol
dacB
Name
(GenBank) DacB
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk00550
Peptidoglycan biosynthesis
lhk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LHK_02836 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lhk01002
]
LHK_02836 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lhk01011
]
LHK_02836 (dacB)
Enzymes [BR:
lhk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LHK_02836 (dacB)
Peptidases and inhibitors [BR:
lhk01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
LHK_02836 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
lhk01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LHK_02836 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ACO75816
UniProt:
C1DDI4
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All DBs
Position
2737932..2739368
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AA seq
478 aa
AA seq
DB search
MKFKHISDKSHSWLSAAVLVAGLLGPAGWAVAAPALPGVPGLSARDLSVWIAPVEGGAPW
LSHRANVAVNPASTMKLVTSFAALDLLGPDYRWRTRWLSPAAIRDGHLTGDLYWQGSGDP
AFDRDALADMARTIRARGIGQIDGRLLLDGQVFRTLGSSSELDPDEGRSYQVGPDALLTQ
FKTVELTLLATPSGWAVRPAPALPGLQIDNRLQRDDSGRECPSAARLVSQTVRGQEVRLS
GRLPESCDGSHLYVPVFDHARFQSEAFAAAWQAAGGQGQPAAASGSTPAGARELARHDSP
PLSQVLTDLNRYSNNVMARQVFLTLGAANPQSGDTARDAASAVRASLARHGIDTQGFAFE
NGAGLSRHERVTAAGLGEMLRAAQATPFWAEFASLLPRPGGEGTLKRRLPALAEQARFKT
GTLNDVRALAGYLDAGGRRWAVVLIANRAGISNAQLDQVLEGLYPQLEAAGHDAAGLQ
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaaacatatcagtgacaagtctcacagctggctgagcgcagcggtcctcgtt
gcgggcctgctcggcccggccggatgggcggtggcagcaccggccctgcccggcgtaccg
ggcctctctgcgcgcgacctctctgtctggatcgcgccggtggagggcggtgcaccgtgg
ctcagccaccgggccaacgtggccgtcaatccggcctcgaccatgaagctggtcaccagc
tttgccgcccttgaccttctggggccggattaccgctggcgcacccgctggctcagcccg
gccgccatccgcgacggccacctgaccggcgacctttactggcagggcagcggcgacccg
gcttttgaccgtgacgcgctggccgacatggcccgtaccatccgcgcccgcggcatcgga
cagatcgacggccggctgctgctggacggacaggtcttccgcacgctgggcagctccagc
gaactcgatcccgacgaaggccgcagctatcaggtcgggcccgacgccctgctgacccag
ttcaagaccgtcgagctgaccctgcttgccacgccgtccggctgggccgtccgtccggcc
ccggccctgcccggcctgcagatcgacaaccggctgcaacgcgacgacagcggacgcgag
tgcccgtctgccgcccggctggtcagccagaccgtgcgtggccaggaggtcaggctgagc
ggccgcctgccggaaagctgcgatggcagccacctgtacgtaccggtatttgaccacgcc
cgtttccagagcgaagccttcgccgccgcctggcaggctgccggcggacagggccagccc
gccgccgccagcggaagcaccccggccggcgcccgcgaactggcccggcatgattcgccg
ccgctgtcgcaggtgctgaccgacctcaaccgttacagcaacaacgtcatggcccgccag
gtgttcctgacactgggtgcggccaatccgcaaagcggtgataccgcccgcgatgccgcc
agtgccgtgcgtgcctcgctggcccgccacggcatcgacacgcagggctttgccttcgaa
aacggcgccggcctgtcgcggcatgagcgcgtcaccgcagccggactcggggaaatgctg
cgggcagcccaggctacgcctttctgggccgagtttgccagcctgctgccgcgccccggg
ggtgagggcacgctgaagcggcgcctgccggcgctggccgaacaggcccgcttcaagacc
ggtaccctcaacgacgtacgggcactggccggttatctggacgccggaggccggcgctgg
gcggtggtgctgattgccaaccgcgccggcatcagcaatgcccagctcgaccaggtgctc
gaagggctgtatccgcagctcgaggccgcaggccacgacgcggccgggctacaatga
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